RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 UTP14AQ9BVJ6 771 aaKnown RBP4.66□□□□□ -1.66
LIMA1-206ENST00000550611 AP5M1Q9H0R1 490 aa4.66□□□□□ -1.66
LIMA1-206ENST00000550611 TMEM168Q9H0V1 697 aa4.66□□□□□ -1.66
LIMA1-206ENST00000550611 MRS2Q9HD23 443 aa4.66□□□□□ -1.66
LIMA1-206ENST00000550611 NUDCQ9Y266 331 aa4.66□□□□□ -1.66
LIMA1-206ENST00000550611 RRP7AQ9Y3A4 280 aaKnown RBP4.66□□□□□ -1.66
LIMA1-206ENST00000550611 CACNA1AO00555 2505 aa4.66□□□□□ -1.66
LIMA1-206ENST00000550611 H7C1D1 291 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 PSMD14O00487 310 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 U2AF1L5P0DN76 240 aaPredicted RBP4.65□□□□□ -1.67
LIMA1-206ENST00000550611 MYL6BP14649 208 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 U2AF1Q01081 240 aaKnown RBP eCLIP4.65□□□□□ -1.67
LIMA1-206ENST00000550611 DPTQ07507 201 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 ABHD18Q0P651 414 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 ADAM9Q13443 819 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 GRAPQ13588 217 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 PRKG1Q13976 671 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 TCEAL1Q15170 157 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 KIF6Q6ZMV9 814 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 STK32CQ86UX6 486 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 NLRP10Q86W26 655 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 FAM126BQ8IXS8 530 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 KBTBD2Q8IY47 623 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 GRAPLQ8TC17 118 aaPredicted RBP4.65□□□□□ -1.67
LIMA1-206ENST00000550611 PLEKHO2Q8TD55 490 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 NKD1Q969G9 470 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 DCPSQ96C86 337 aaKnown RBP4.65□□□□□ -1.67
LIMA1-206ENST00000550611 PLEKHF1Q96S99 279 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 CEP89Q96ST8 783 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 TM9SF2Q99805 663 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 NT5C1AQ9BXI3 368 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 MEGF9Q9H1U4 602 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 L2HGDHQ9H9P8 463 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 JADE2Q9NQC1 790 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 FZD1Q9UP38 647 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 PTCH2Q9Y6C5 1203 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 LAMB4A4D0S4 1761 aa4.65□□□□□ -1.67
LIMA1-206ENST00000550611 NPHP3-ACAD11A0A0J9YXS1 232 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 C7orf72A4D263 438 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 C2orf71A6NGG8 1288 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 E9PSI1 815 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 STXBP3O00186 592 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 SGSM2O43147 1006 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 CBFA2T2O43439 604 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 NPHS1O60500 1241 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 TP53P04637 393 aaPredicted RBP4.64□□□□□ -1.67
LIMA1-206ENST00000550611 VIL1P09327 827 aaKnown RBP4.64□□□□□ -1.67
LIMA1-206ENST00000550611 PAMP19021 973 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 RPS12P25398 132 aaKnown RBP4.64□□□□□ -1.67
LIMA1-206ENST00000550611 PPP2R1AP30153 589 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 ZNF280AP59817 542 aaPredicted RBP4.64□□□□□ -1.67
LIMA1-206ENST00000550611 TCIRG1Q13488 830 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 SF3B3Q15393 1217 aaKnown RBP4.64□□□□□ -1.67
LIMA1-206ENST00000550611 PROSER3Q2NL68 480 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 HS1BP3Q53T59 392 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 RNF207Q6ZRF8 634 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 FBXO33Q7Z6M2 555 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 CPNE8Q86YQ8 564 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 SEC14L1Q92503 715 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 RNF34Q969K3 372 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 ZNF503Q96F45 646 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 CFAP53Q96M91 514 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 THUMPD2Q9BTF0 503 aaKnown RBP4.64□□□□□ -1.67
LIMA1-206ENST00000550611 TMX4Q9H1E5 349 aaPredicted RBP4.64□□□□□ -1.67
LIMA1-206ENST00000550611 WHRNQ9P202 907 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 POLLQ9UGP5 575 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 ZNF214Q9UL59 606 aaPredicted RBP4.64□□□□□ -1.67
LIMA1-206ENST00000550611 BACE2Q9Y5Z0 518 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 RTL9Q8NET4 1388 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 CDH23Q9H251 3354 aa4.64□□□□□ -1.67
LIMA1-206ENST00000550611 CYP7B1O75881 506 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 FUCA1P04066 466 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 SLC6A11P48066 632 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 FKBP1BP68106 108 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 GPSM2P81274 684 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 HNRNPA0Q13151 305 aaKnown RBP4.63□□□□□ -1.67
LIMA1-206ENST00000550611 PPP2R5DQ14738 602 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 CR1LQ2VPA4 569 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 SLC9C1Q4G0N8 1177 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 DDX46Q7L014 1031 aaKnown RBP4.63□□□□□ -1.67
LIMA1-206ENST00000550611 COPS6Q7L5N1 327 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 KLHL36Q8N4N3 616 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 CELF1Q92879 486 aaKnown RBP4.63□□□□□ -1.67
LIMA1-206ENST00000550611 GMLQ99445 158 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 PTPN18Q99952 460 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 PCGF6Q9BYE7 350 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 IKZF4Q9H2S9 585 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 DBNDD1Q9H9R9 158 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 BABAM1Q9NWV8 329 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 GGA3Q9NZ52 723 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 RPTORQ8N122 1335 aa4.63□□□□□ -1.67
LIMA1-206ENST00000550611 DUOX1Q9NRD9 1551 aa4.62□□□□□ -1.67
LIMA1-206ENST00000550611 ECE2O60344 883 aa4.62□□□□□ -1.67
LIMA1-206ENST00000550611 ZNF202O95125 648 aa4.62□□□□□ -1.67
LIMA1-206ENST00000550611 ANXA1P04083 346 aa4.62□□□□□ -1.67
LIMA1-206ENST00000550611 NKX3-2P78367 333 aa4.62□□□□□ -1.67
LIMA1-206ENST00000550611 CRHR2Q13324 411 aa4.62□□□□□ -1.67
LIMA1-206ENST00000550611 CNGB1Q14028 1251 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-206ENST00000550611 PRKD1Q15139 912 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-206ENST00000550611 NFE2L2Q16236 605 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms