RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 PRSS33Q8NF86 280 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 NLRP4Q96MN2 994 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 ZBP1Q9H171 429 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 ADAM7Q9H2U9 754 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 NRDE2Q9H7Z3 1164 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 IFT122Q9HBG6 1241 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 TBC1D13Q9NVG8 400 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 CDH22Q9UJ99 828 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 IRAK3Q9Y616 596 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 RAB27AP51159 221 aa24.31■■□□□ 1.48
SMARCC2-210ENST00000550519 POLGP54098 1239 aaPredicted RBP24.31■■□□□ 1.48
SMARCC2-210ENST00000550519 NPEPPSP55786 919 aa24.31■■□□□ 1.48
SMARCC2-210ENST00000550519 LONRF3Q496Y0 759 aa24.31■■□□□ 1.48
SMARCC2-210ENST00000550519 NOMO2Q5JPE7 1267 aa24.31■■□□□ 1.48
SMARCC2-210ENST00000550519 GLB1LQ6UWU2 654 aa24.31■■□□□ 1.48
SMARCC2-210ENST00000550519 DDX53Q86TM3 631 aaKnown RBP24.31■■□□□ 1.48
SMARCC2-210ENST00000550519 IGSF21Q96ID5 467 aa24.31■■□□□ 1.48
SMARCC2-210ENST00000550519 PDRG1Q9NUG6 133 aa24.31■■□□□ 1.48
SMARCC2-210ENST00000550519 CCDC194A0A1B0GVG4 234 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 DKC1O60832 514 aaKnown RBP eCLIP24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 OFD1O75665 1012 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 P4HBP07237 508 aaKnown RBP24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 GALTP07902 379 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 CTSAP10619 480 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 GCFC2P16383 781 aaKnown RBP24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 SCRN1Q12765 414 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 CES5AQ6NT32 575 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 NEK8Q86SG6 692 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 ZNF579Q8NAF0 562 aaKnown RBP24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 SLC7A3Q8WY07 619 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 NECTIN4Q96NY8 510 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 PRRX2Q99811 253 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 POMKQ9H5K3 350 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 DHX33Q9H6R0 707 aaKnown RBP24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 AGPAT5Q9NUQ2 364 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 WRAP73Q9P2S5 460 aaPredicted RBP24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 NR2E1Q9Y466 385 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 PPME1Q9Y570 386 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 COL4A3BPQ9Y5P4 624 aa24.3■■□□□ 1.48
SMARCC2-210ENST00000550519 SP100P23497 879 aaPredicted RBP24.29■■□□□ 1.48
SMARCC2-210ENST00000550519 GIT2Q14161 759 aa24.29■■□□□ 1.48
SMARCC2-210ENST00000550519 EXOC8Q8IYI6 725 aa24.29■■□□□ 1.48
SMARCC2-210ENST00000550519 BCL7CQ8WUZ0 217 aaPredicted RBP24.29■■□□□ 1.48
SMARCC2-210ENST00000550519 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 TBX3O15119 743 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 CDKL5O76039 1030 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 CA8P35219 290 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 C4orf19Q8IY42 314 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 PRPF31Q8WWY3 499 aaKnown RBP24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 AUTS2Q8WXX7 1259 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 HAS1Q92839 578 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 PGBD4Q96DM1 585 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 CEP170P1Q96L14 293 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 SLKQ9H2G2 1235 aaPredicted RBP24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 DNAJB4Q9UDY4 337 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 INPP5FQ9Y2H2 1132 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 PCDHB2Q9Y5E7 798 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 STK36Q9NRP7 1315 aa24.28■■□□□ 1.48
SMARCC2-210ENST00000550519 MTHFRP42898 656 aa24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 PTPN5P54829 565 aa24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 RNASELQ05823 741 aaKnown RBP24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 EPHA7Q15375 998 aa24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 AGMOQ6ZNB7 445 aa24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 SRGAP1Q7Z6B7 1085 aa24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 MRPL10Q7Z7H8 261 aaKnown RBP24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 PSPC1Q8WXF1 523 aaKnown RBP24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 MINDY3Q9H8M7 445 aa24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 TSHZ2Q9NRE2 1034 aa24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 GJB4Q9NTQ9 266 aa24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 DZANK1Q9NVP4 752 aa24.27■■□□□ 1.48
SMARCC2-210ENST00000550519 C2CD4DB7Z1M9 353 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 B4GALT3O60512 393 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 CCNT1O60563 726 aaKnown RBP24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 XBP1P17861 261 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 HOXA11P31270 313 aaPredicted RBP24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 RFC5P40937 340 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 SLC11A1P49279 550 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 PIK3AP1Q6ZUJ8 805 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 ZBTB33Q86T24 672 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 ZNF280BQ86YH2 543 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 C12orf76Q8N812 135 aaPredicted RBP24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 OXER1Q8TDS5 423 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 SLC22A17Q8WUG5 538 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 TMEM143Q96AN5 459 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 RIPOR3Q96MK2 946 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 NAP1L4Q99733 375 aaKnown RBP24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 VN1R3Q9BXE9 311 aa24.26■■□□□ 1.47
SMARCC2-210ENST00000550519 PFKFB2O60825 505 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 SRGAP2CP0DJJ0 459 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 EPCAMP16422 314 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 VCPP55072 806 aaKnown RBP24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 LAMTOR4Q0VGL1 99 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 TCF15Q12870 199 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 RARS2Q5T160 578 aaKnown RBP24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 TMEM87AQ8NBN3 555 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 KREMEN2Q8NCW0 462 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 PHOX2BQ99453 314 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 LXNQ9BS40 222 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 GBP3Q9H0R5 595 aa24.25■■□□□ 1.47
SMARCC2-210ENST00000550519 RGL1Q9NZL6 768 aa24.25■■□□□ 1.47
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