RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 TRIM21P19474 475 aaKnown RBP13.76□□□□□ -0.21
CACNB3-217ENST00000550483 GARTP22102 1010 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 ZBED6P86452 979 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 RBL2Q08999 1139 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 TFDP1Q14186 410 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 SYCP1Q15431 976 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 DGKDQ16760 1214 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 CEP135Q66GS9 1140 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 TMTC1Q8IUR5 882 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 FAM186BQ8IYM0 893 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 XXYLT1Q8NBI6 393 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 NPLOC4Q8TAT6 608 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 DEPTORQ8TB45 409 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 PSPC1Q8WXF1 523 aaKnown RBP13.76□□□□□ -0.21
CACNB3-217ENST00000550483 PCMTD1Q96MG8 357 aaPredicted RBP13.76□□□□□ -0.21
CACNB3-217ENST00000550483 ZNF830Q96NB3 372 aaPredicted RBP13.76□□□□□ -0.21
CACNB3-217ENST00000550483 PDGFCQ9NRA1 345 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 ZNHIT6Q9NWK9 470 aaKnown RBP13.76□□□□□ -0.21
CACNB3-217ENST00000550483 ZHX1Q9UKY1 873 aaPredicted RBP13.76□□□□□ -0.21
CACNB3-217ENST00000550483 TRPC6Q9Y210 931 aa13.76□□□□□ -0.21
CACNB3-217ENST00000550483 ZNFX1Q9P2E3 1918 aaKnown RBP13.76□□□□□ -0.21
CACNB3-217ENST00000550483 KIF2AO00139 706 aaPredicted RBP13.75□□□□□ -0.21
CACNB3-217ENST00000550483 P4HA2O15460 535 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 ZSCAN12O43309 604 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 SORBS3O60504 671 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 AKAP3O75969 853 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 PIGRP01833 764 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 LGALS2P05162 132 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 ADCYAP1R1P41586 468 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 MCCD1P59942 119 aaPredicted RBP13.75□□□□□ -0.21
CACNB3-217ENST00000550483 TNFAIP2Q03169 654 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 POU5F1BQ06416 359 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 CETN1Q12798 172 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 LRMPQ12912 555 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 KIF22Q14807 665 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 NOLC1Q14978 699 aaKnown RBP eCLIP13.75□□□□□ -0.21
CACNB3-217ENST00000550483 SLFN12LQ6IEE8 588 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 ZBTB8OSQ8IWT0 167 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 OR6J1Q8NGC5 347 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 OR8K1Q8NGG5 319 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 GPRC5CQ9NQ84 441 aa13.75□□□□□ -0.21
CACNB3-217ENST00000550483 RANBP2P49792 3224 aaKnown RBP13.75□□□□□ -0.21
CACNB3-217ENST00000550483 PMM2O15305 246 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 FKTNO75072 461 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 SMPD1P17405 629 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 RFX1P22670 979 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 TMOD1P28289 359 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 CASP14P31944 242 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 KRT9P35527 623 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 CDC42EP1Q00587 391 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 KCNH2Q12809 1159 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 ZNF710Q8N1W2 664 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 NEK11Q8NG66 645 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 VTI1AQ96AJ9 217 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 BORCS6Q96GS4 357 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 DNAJC7Q99615 494 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 NFKBIZQ9BYH8 718 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 TTYH3Q9C0H2 523 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 PLCB1Q9NQ66 1216 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 ABHD10Q9NUJ1 306 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 FBXL5Q9UKA1 691 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 GJD2Q9UKL4 321 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 PYCARDQ9ULZ3 195 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 SIK3Q9Y2K2 1263 aa13.74□□□□□ -0.21
CACNB3-217ENST00000550483 RRN3P2A6NIE6 340 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 A6NJR5 290 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 CLIC2O15247 247 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 ADCY3O60266 1144 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 KPNA6O60684 536 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 LDHAP00338 332 aaKnown RBP13.73□□□□□ -0.21
CACNB3-217ENST00000550483 IGHA2P01877 340 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 MMP3P08254 477 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 EN2P19622 333 aaPredicted RBP13.73□□□□□ -0.21
CACNB3-217ENST00000550483 GLRA2P23416 452 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 CPT1AP50416 773 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 CDK17Q00537 523 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 KCNA1Q09470 495 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 BFSP1Q12934 665 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 MFSD14CQ5VZR4 134 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 CYP26C1Q6V0L0 522 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 ZPBP2Q6X784 338 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 TRMT1LQ7Z2T5 733 aaKnown RBP13.73□□□□□ -0.21
CACNB3-217ENST00000550483 AFG1LQ8WV93 481 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 BSNDQ8WZ55 320 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 COPS5Q92905 334 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 SLC35C1Q96A29 364 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 EEF2KMTQ96G04 330 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 SH2D3AQ9BRG2 576 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 KATNAL1Q9BW62 490 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 HSPBP1Q9NZL4 362 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 CEP72Q9P209 647 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 MYO6Q9UM54 1294 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 COLQQ9Y215 455 aaPredicted RBP13.73□□□□□ -0.21
CACNB3-217ENST00000550483 TELO2Q9Y4R8 837 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 STYXL1Q9Y6J8 313 aa13.73□□□□□ -0.21
CACNB3-217ENST00000550483 MYH9P35579 1960 aaKnown RBP13.72□□□□□ -0.21
CACNB3-217ENST00000550483 TTC26A0AVF1 554 aa13.72□□□□□ -0.21
CACNB3-217ENST00000550483 K7ERI5 159 aa13.72□□□□□ -0.21
CACNB3-217ENST00000550483 HNRNPDLO14979 420 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms