RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TRIM46Q7Z4K8 759 aa8.62□□□□□ -1.03
NEK3-201ENST00000550331 ADGRD2Q7Z7M1 963 aa8.62□□□□□ -1.03
NEK3-201ENST00000550331 FAM228AQ86W67 206 aa8.62□□□□□ -1.03
NEK3-201ENST00000550331 SKAP1Q86WV1 359 aa8.62□□□□□ -1.03
NEK3-201ENST00000550331 SMRP1Q8NCR6 262 aa8.62□□□□□ -1.03
NEK3-201ENST00000550331 BRF1Q92994 677 aa8.62□□□□□ -1.03
NEK3-201ENST00000550331 THAP11Q96EK4 314 aa8.62□□□□□ -1.03
NEK3-201ENST00000550331 JAKMIP1Q96N16 626 aaKnown RBP8.62□□□□□ -1.03
NEK3-201ENST00000550331 CDCA3Q99618 268 aaPredicted RBP8.62□□□□□ -1.03
NEK3-201ENST00000550331 OSMRQ99650 979 aa8.62□□□□□ -1.03
NEK3-201ENST00000550331 RNF26Q9BY78 433 aaPredicted RBP8.62□□□□□ -1.03
NEK3-201ENST00000550331 IRF2BPLQ9H1B7 796 aa8.62□□□□□ -1.03
NEK3-201ENST00000550331 CLEC1BQ9P126 229 aa8.62□□□□□ -1.03
NEK3-201ENST00000550331 GABBR1Q9UBS5 961 aa8.62□□□□□ -1.03
NEK3-201ENST00000550331 RCCD1A6NED2 376 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 TBKBP1A7MCY6 615 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 ADAMTS3O15072 1205 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 HOXA2O43364 376 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 FGF18O76093 207 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 GLP2RO95838 553 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 CPA1P15085 419 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 LAG3P18627 525 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 RPS6KB1P23443 525 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 TMOD1P28289 359 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 SFNP31947 248 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 NRIP1P48552 1158 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 USP11P51784 963 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 VCPP55072 806 aaKnown RBP8.61□□□□□ -1.03
NEK3-201ENST00000550331 EVCP57679 992 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 DSC3Q14574 896 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 NTRK3Q16288 839 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 SPOUT1Q5T280 376 aaKnown RBP8.61□□□□□ -1.03
NEK3-201ENST00000550331 FAM102BQ5T8I3 360 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 THNSL1Q8IYQ7 743 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 FAM160A2Q8N612 972 aaPredicted RBP8.61□□□□□ -1.03
NEK3-201ENST00000550331 METTL13Q8N6R0 699 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 LINC01465Q8N7H1 131 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 PHKBQ93100 1093 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 LENG9Q96B70 501 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 MAP7D2Q96T17 732 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 RIT2Q99578 217 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 TLE6Q9H808 572 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 ATP6V0A4Q9HBG4 840 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 TLR9Q9NR96 1032 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 LZTS1Q9Y250 596 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 SNX14Q9Y5W7 946 aa8.61□□□□□ -1.03
NEK3-201ENST00000550331 DNMT3AQ9Y6K1 912 aaPredicted RBP8.61□□□□□ -1.03
NEK3-201ENST00000550331 TTC3P53804 2025 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.6□□□□□ -1.03
NEK3-201ENST00000550331 LOC730098B7Z3J9 87 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 PPFIA3O75145 1194 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 REC8O95072 547 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 VTNP04004 478 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 OATP04181 439 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 SRGAP2BP0DMP2 458 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 FGFR1P11362 822 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 IFNAR1P17181 557 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 IBSPP21815 317 aaPredicted RBP8.6□□□□□ -1.03
NEK3-201ENST00000550331 EIF4BP23588 611 aaKnown RBP8.6□□□□□ -1.03
NEK3-201ENST00000550331 PSMA5P28066 241 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 CLCN3P51790 818 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 NLRP11P59045 1033 aaKnown RBP8.6□□□□□ -1.03
NEK3-201ENST00000550331 PLCB3Q01970 1234 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 SIGLEC14Q08ET2 396 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 DUSP6Q16828 381 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 EFCAB12Q6NXP0 572 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 TMEM184AQ6ZMB5 413 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 LRRC43Q8N309 656 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 COLGALT1Q8NBJ5 622 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 RDM1Q8NG50 284 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 RASGRP4Q8TDF6 673 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 MICAL1Q8TDZ2 1067 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 PPP1R16BQ96T49 567 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 C22orf23Q9BZE7 217 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 TMEM117Q9H0C3 514 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 SH3GLB2Q9NR46 395 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 DISC1Q9NRI5 854 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 NRBP2Q9NSY0 501 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 TYW1Q9NV66 732 aaKnown RBP8.6□□□□□ -1.03
NEK3-201ENST00000550331 BARX2Q9UMQ3 279 aaPredicted RBP8.6□□□□□ -1.03
NEK3-201ENST00000550331 AKT3Q9Y243 479 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 SAMM50Q9Y512 469 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 BAZ2BQ9UIF8 2168 aaKnown RBP8.6□□□□□ -1.03
NEK3-201ENST00000550331 MYO10Q9HD67 2058 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 PLXNA4Q9HCM2 1894 aa8.6□□□□□ -1.03
NEK3-201ENST00000550331 LOXHD1Q8IVV2 1947 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 H0Y858 1186 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 FSCN2O14926 492 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 MSH4O15457 936 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 EPB41L2O43491 1005 aaKnown RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 ZNF862O60290 1169 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 GAS7O60861 476 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 ZSCAN20P17040 1043 aaPredicted RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 ATF7P17544 494 aaPredicted RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 PDIA3P30101 505 aaKnown RBP8.59□□□□□ -1.03
NEK3-201ENST00000550331 AVPR2P30518 371 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 PPM1AP35813 382 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 GPC3P51654 580 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 JAK3P52333 1124 aa8.59□□□□□ -1.03
NEK3-201ENST00000550331 CDC42EP1Q00587 391 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms