RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 CDAN1Q8IWY9 1227 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 DAW1Q8N136 415 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 USP38Q8NB14 1042 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 CHST13Q8NET6 341 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 TPCN2Q8NHX9 752 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 IL31RAQ8NI17 732 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 CCDC26Q8TAB7 109 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 SLC30A5Q8TAD4 765 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 AENQ8WTP8 325 aaKnown RBP9.7□□□□□ -0.86
TMEM116-209ENST00000550020 INPP4AQ96PE3 977 aaPredicted RBP9.7□□□□□ -0.86
TMEM116-209ENST00000550020 WRNIP1Q96S55 665 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 NTPCRQ9BSD7 190 aaKnown RBP9.7□□□□□ -0.86
TMEM116-209ENST00000550020 LRRC1Q9BTT6 524 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 SLITRK6Q9H5Y7 841 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 KMT5AQ9NQR1 393 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 RNF216Q9NWF9 866 aaPredicted RBP9.7□□□□□ -0.86
TMEM116-209ENST00000550020 HSPBP1Q9NZL4 362 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 CALCOCO1Q9P1Z2 691 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 VPS18Q9P253 973 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 SALL4Q9UJQ4 1053 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 AMFRQ9UKV5 643 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 HPCAL4Q9UM19 191 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 ADAMTS5Q9UNA0 930 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 PPME1Q9Y570 386 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 GJA3Q9Y6H8 435 aa9.7□□□□□ -0.86
TMEM116-209ENST00000550020 ASTN2O75129 1339 aaPredicted RBP9.7□□□□□ -0.86
TMEM116-209ENST00000550020 GOLGA6L10A0A0M3HER8 536 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 CCDC169A6NNP5 214 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 NFKBIEO00221 500 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 DDX3XO00571 662 aaKnown RBP eCLIP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 ZBTB39O15060 712 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 CEP104O60308 925 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 ZC3H11AO75152 810 aaKnown RBP eCLIP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 CXCR5P32302 372 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 MXI1P50539 228 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 GALCP54803 685 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 PEX3P56589 373 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 BAATQ14032 418 aaPredicted RBP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 PLS1Q14651 629 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 TBC1D10BQ4KMP7 808 aaPredicted RBP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 BRDTQ58F21 947 aaPredicted RBP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 KRT39Q6A163 491 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 PPP1R2P3Q6NXS1 205 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 SND1Q7KZF4 910 aaKnown RBP eCLIP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 MAATS1Q7Z4T9 603 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 EMSYQ7Z589 1322 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 DAAM2Q86T65 1068 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 MAP4K3Q8IVH8 894 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 LRRC57Q8N9N7 239 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 DNERQ8NFT8 737 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 ATG4CQ96DT6 458 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 CEP170P1Q96L14 293 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 AGPAT1Q99943 283 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 JPH1Q9HDC5 661 aaPredicted RBP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 RGS17Q9UGC6 210 aaPredicted RBP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 ADAM21Q9UKJ8 722 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 TTC7AQ9ULT0 858 aaPredicted RBP9.69□□□□□ -0.86
TMEM116-209ENST00000550020 TBX20Q9UMR3 447 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 IGSF9BQ9UPX0 1349 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 BCS1LQ9Y276 419 aa9.69□□□□□ -0.86
TMEM116-209ENST00000550020 LRRIQ3A6PVS8 624 aaPredicted RBP9.68□□□□□ -0.86
TMEM116-209ENST00000550020 BACH1O14867 736 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 SLC16A4O15374 487 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 ERLIN2O94905 339 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 TFRCP02786 760 aaKnown RBP9.68□□□□□ -0.86
TMEM116-209ENST00000550020 IVLP07476 585 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 TRIM49P0CI25 452 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 TRIM49CP0CI26 452 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 GZMAP12544 262 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 GARTP22102 1010 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 GBP1P32455 592 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 COPB2P35606 906 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 BPIFB4P59827 614 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 STRN3Q13033 797 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 STXBP2Q15833 593 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 SNRNP35Q16560 246 aaKnown RBP9.68□□□□□ -0.86
TMEM116-209ENST00000550020 CBWD6Q4V339 395 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 EPC2Q52LR7 807 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 XKR3Q5GH77 459 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 CBWD3Q5JTY5 395 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 CBWD5Q5RIA9 395 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 NBPF12Q5TAG4 269 aaPredicted RBP9.68□□□□□ -0.86
TMEM116-209ENST00000550020 SLFN12LQ6IEE8 588 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 C11orf63Q6NUN7 778 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 CATSPERGQ6ZRH7 1159 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 MAEAQ7L5Y9 396 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 DEFB132Q7Z7B7 95 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 GLYCTKQ8IVS8 523 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 EXOC8Q8IYI6 725 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 RASGEF1CQ8N431 466 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 MREGQ8N565 214 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 UBL4BQ8N7F7 174 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 AFAP1L1Q8TED9 768 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 DHX38Q92620 1227 aaKnown RBP9.68□□□□□ -0.86
TMEM116-209ENST00000550020 KCNN1Q92952 543 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 LRRC45Q96CN5 670 aa9.68□□□□□ -0.86
TMEM116-209ENST00000550020 RUNDC3BQ96NL0 473 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms