RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 MTHFRP42898 656 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 CDC42EP1Q00587 391 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 NOMO2Q5JPE7 1267 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 GLB1LQ6UWU2 654 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 ANO5Q75V66 913 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 CATSPER4Q7RTX7 472 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 DDX53Q86TM3 631 aaKnown RBP17.3■□□□□ 0.36
RAB5C-205ENST00000550013 ZNF410Q86VK4 478 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 NLRP4Q96MN2 994 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 VN1R3Q9BXE9 311 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 C22orf23Q9BZE7 217 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 GBP3Q9H0R5 595 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 FAM105AQ9NUU6 356 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 DNAJB4Q9UDY4 337 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 DENND4AQ7Z401 1863 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 CFAP54Q96N23 3096 aa17.3■□□□□ 0.36
RAB5C-205ENST00000550013 EML1O00423 815 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 SLC37A4O43826 429 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 OFD1O75665 1012 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 ASGR2P07307 311 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 GALTP07902 379 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 CTSAP10619 480 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 SLC11A1P49279 550 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 POLGP54098 1239 aaPredicted RBP17.29■□□□□ 0.36
RAB5C-205ENST00000550013 NPEPPSP55786 919 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 MTMR3Q13615 1198 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 BMS1Q14692 1282 aaKnown RBP17.29■□□□□ 0.36
RAB5C-205ENST00000550013 RUFY3Q7L099 469 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 ZNF579Q8NAF0 562 aaKnown RBP17.29■□□□□ 0.36
RAB5C-205ENST00000550013 DAGLBQ8NCG7 672 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 SLC22A17Q8WUG5 538 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 INO80BQ9C086 356 aaPredicted RBP17.29■□□□□ 0.36
RAB5C-205ENST00000550013 DZANK1Q9NVP4 752 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 DDX25Q9UHL0 483 aaKnown RBP17.29■□□□□ 0.36
RAB5C-205ENST00000550013 SORCS3Q9UPU3 1222 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 PLXNA3P51805 1871 aa17.29■□□□□ 0.36
RAB5C-205ENST00000550013 DEXIO95424 95 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 SKIP12755 728 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 PSMC5P62195 406 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 RNASELQ05823 741 aaKnown RBP17.28■□□□□ 0.36
RAB5C-205ENST00000550013 NONOQ15233 471 aaKnown RBP eCLIP17.28■□□□□ 0.36
RAB5C-205ENST00000550013 INF2Q27J81 1249 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 KIAA1841Q6NSI8 718 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 MOXD1Q6UVY6 613 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 ZNF280BQ86YH2 543 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 UBALD2Q8IYN6 164 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 TMEM87AQ8NBN3 555 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 IFT122Q9HBG6 1241 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 ZSWIM6Q9HCJ5 1215 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 LIMD1Q9UGP4 676 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 IRAK3Q9Y616 596 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 C2orf16Q68DN1 1984 aa17.28■□□□□ 0.36
RAB5C-205ENST00000550013 H0Y858 1186 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 CPLX1O14810 134 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 ZNF623O75123 536 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 REC8O95072 547 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 RAB27AP51159 221 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 AFF1P51825 1210 aaKnown RBP17.27■□□□□ 0.36
RAB5C-205ENST00000550013 STK3Q13188 491 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 LETM2Q2VYF4 491 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 TMC5Q6UXY8 1006 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 AGMOQ6ZNB7 445 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 TDRD5Q8NAT2 981 aaKnown RBP17.27■□□□□ 0.36
RAB5C-205ENST00000550013 RSPH1Q8WYR4 309 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 ATOH1Q92858 354 aaPredicted RBP17.27■□□□□ 0.36
RAB5C-205ENST00000550013 CYP26B1Q9NR63 512 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 AGPAT5Q9NUQ2 364 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 WRAP73Q9P2S5 460 aaPredicted RBP17.27■□□□□ 0.36
RAB5C-205ENST00000550013 DBR1Q9UK59 544 aaKnown RBP17.27■□□□□ 0.36
RAB5C-205ENST00000550013 VAV3Q9UKW4 847 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 KCNJ14Q9UNX9 436 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 PCDHB2Q9Y5E7 798 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 COL4A3BPQ9Y5P4 624 aa17.27■□□□□ 0.36
RAB5C-205ENST00000550013 ARID2Q68CP9 1835 aa17.26■□□□□ 0.35
RAB5C-205ENST00000550013 SSBP05455 408 aaKnown RBP eCLIP17.26■□□□□ 0.35
RAB5C-205ENST00000550013 QARSP47897 775 aaKnown RBP17.26■□□□□ 0.35
RAB5C-205ENST00000550013 PTPN14Q15678 1187 aa17.26■□□□□ 0.35
RAB5C-205ENST00000550013 ATAT1Q5SQI0 421 aa17.26■□□□□ 0.35
RAB5C-205ENST00000550013 KRT25Q7Z3Z0 450 aa17.26■□□□□ 0.35
RAB5C-205ENST00000550013 ZDHHC14Q8IZN3 488 aa17.26■□□□□ 0.35
RAB5C-205ENST00000550013 TMEM105Q8N8V8 129 aa17.26■□□□□ 0.35
RAB5C-205ENST00000550013 ZNF274Q96GC6 653 aaPredicted RBP17.26■□□□□ 0.35
RAB5C-205ENST00000550013 JPH2Q9BR39 696 aaPredicted RBP17.26■□□□□ 0.35
RAB5C-205ENST00000550013 MINDY3Q9H8M7 445 aa17.26■□□□□ 0.35
RAB5C-205ENST00000550013 BMP2KQ9NSY1 1161 aaPredicted RBP17.26■□□□□ 0.35
RAB5C-205ENST00000550013 CYP46A1Q9Y6A2 500 aa17.26■□□□□ 0.35
RAB5C-205ENST00000550013 ST18O60284 1047 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 GFRA3O60609 400 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 DTNBO60941 627 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 DDHD2O94830 711 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 SRGAP2CP0DJJ0 459 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 PPP2R5CQ13362 524 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 GIT2Q14161 759 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 UBXN11Q5T124 520 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 GALNT17Q6IS24 598 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 CABP7Q86V35 215 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 URGCPQ8TCY9 931 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 PRPF31Q8WWY3 499 aaKnown RBP17.25■□□□□ 0.35
RAB5C-205ENST00000550013 TMEM143Q96AN5 459 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 PGBD4Q96DM1 585 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms