RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 SCP2P22307 547 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 DNAJB2P25686 324 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 HOXA11P31270 313 aaPredicted RBP13.18□□□□□ -0.3
PFDN5-208ENST00000549995 SARSP49591 514 aaKnown RBP13.18□□□□□ -0.3
PFDN5-208ENST00000549995 FAM102BQ5T8I3 360 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 RRAGBQ5VZM2 374 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 CNNM4Q6P4Q7 775 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 SLC24A5Q71RS6 500 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 ZNF598Q86UK7 904 aaKnown RBP13.18□□□□□ -0.3
PFDN5-208ENST00000549995 NPAS4Q8IUM7 802 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 RSPH1Q8WYR4 309 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 MAGEF1Q9HAY2 307 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
PFDN5-208ENST00000549995 KCNG1Q9UIX4 513 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 ZMYM2Q9UBW7 1377 aa13.18□□□□□ -0.3
PFDN5-208ENST00000549995 CNTNAP2Q9UHC6 1331 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 FRMD3A2A2Y4 597 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 GRXCR1A8MXD5 290 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 RBAK-RBAKDNI3L0D1 243 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 TSPAN1O60635 241 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 ZNF623O75123 536 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 SRGAP2CP0DJJ0 459 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 CMA1P23946 247 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 NFX1Q12986 1120 aaKnown RBP13.17□□□□□ -0.3
PFDN5-208ENST00000549995 GIT2Q14161 759 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 MCM6Q14566 821 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 LRCH3Q96II8 777 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 ZNF668Q96K58 619 aaPredicted RBP13.17□□□□□ -0.3
PFDN5-208ENST00000549995 SPATA32Q96LK8 384 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 FIZ1Q96SL8 496 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 RAD9AQ99638 391 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 ADAM2Q99965 735 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 REEP2Q9BRK0 252 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 PYM1Q9BRP8 204 aaKnown RBP13.17□□□□□ -0.3
PFDN5-208ENST00000549995 TNMDQ9H2S6 317 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 TMEM134Q9H6X4 195 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 PRMT7Q9NVM4 692 aaPredicted RBP13.17□□□□□ -0.3
PFDN5-208ENST00000549995 KBTBD4Q9NVX7 518 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 TMEM161AQ9NX61 479 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 DACT1Q9NYF0 836 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 CHD7Q9P2D1 2997 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
PFDN5-208ENST00000549995 CDH23Q9H251 3354 aa13.17□□□□□ -0.3
PFDN5-208ENST00000549995 ATG2AQ2TAZ0 1938 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 A0A0U1RQF3 1178 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 DGKIO75912 1065 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 LINC00271P0C7V0 271 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 PLS3P13797 630 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 ATF7P17544 494 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-208ENST00000549995 FGFR4P22455 802 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 PBX2P40425 430 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 NPTX2P47972 431 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 ME1P48163 572 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 RAB27AP51159 221 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 EFNA5P52803 228 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 NCKAP1LP55160 1127 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 ZRSR1Q15695 479 aaKnown RBP13.16□□□□□ -0.3
PFDN5-208ENST00000549995 FOXD4L6Q3SYB3 417 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-208ENST00000549995 UBXN11Q5T124 520 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 FOXD4L3Q6VB84 417 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-208ENST00000549995 CATSPER4Q7RTX7 472 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 GPBP1Q86WP2 473 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 ZBTB8OSQ8IWT0 167 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 MYOCDQ8IZQ8 938 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 DNAJC19Q96DA6 116 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 CHAMP1Q96JM3 812 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 IFT74Q96LB3 600 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 SCLT1Q96NL6 688 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 PLIN2Q99541 437 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 ST6GALNAC4Q9H4F1 302 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 TSHZ2Q9NRE2 1034 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 INSL6Q9Y581 213 aa13.16□□□□□ -0.3
PFDN5-208ENST00000549995 PDCD11Q14690 1871 aaKnown RBP13.16□□□□□ -0.3
PFDN5-208ENST00000549995 A0A1B0GUA9 196 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 DENND3A2RUS2 1198 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 LRRIQ4A6NIV6 560 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 ACKR2O00590 384 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 INPPL1O15357 1258 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 CSDE1O75534 798 aaKnown RBP13.15□□□□□ -0.3
PFDN5-208ENST00000549995 EOMESO95936 686 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 EDN1P05305 212 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 STAG3L1P0CL83 205 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 MAPTP10636 758 aaKnown RBP13.15□□□□□ -0.3
PFDN5-208ENST00000549995 ZSCAN20P17040 1043 aaPredicted RBP13.15□□□□□ -0.3
PFDN5-208ENST00000549995 STAT6P42226 847 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 DMP1Q13316 513 aaPredicted RBP13.15□□□□□ -0.3
PFDN5-208ENST00000549995 SV2BQ7L1I2 683 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 MAEAQ7L5Y9 396 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 TAS1R3Q7RTX0 852 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
PFDN5-208ENST00000549995 ECHDC2Q86YB7 292 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 RASSF8Q8NHQ8 419 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 TIFAQ96CG3 184 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 TTYH1Q9H313 450 aaPredicted RBP13.15□□□□□ -0.3
PFDN5-208ENST00000549995 RNF19AQ9NV58 838 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 FAM13BQ9NYF5 915 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 CHMP5Q9NZZ3 219 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 LARSQ9P2J5 1176 aaKnown RBP13.15□□□□□ -0.3
PFDN5-208ENST00000549995 MSRAQ9UJ68 235 aa13.15□□□□□ -0.3
PFDN5-208ENST00000549995 RBM19Q9Y4C8 960 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms