RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 MICAL1Q8TDZ2 1067 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 MRPS27Q92552 414 aaKnown RBP26.9■■□□□ 1.9
USP44-205ENST00000549639 PGBD4Q96DM1 585 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 TMEM60Q9H2L4 133 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 IGFLR1Q9H665 355 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 TUFT1Q9NNX1 390 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 FAM105AQ9NUU6 356 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 PRKAG3Q9UGI9 489 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 KIF3AQ9Y496 699 aa26.9■■□□□ 1.9
USP44-205ENST00000549639 IL9P15248 144 aa26.89■■□□□ 1.9
USP44-205ENST00000549639 TFDP1Q14186 410 aa26.89■■□□□ 1.9
USP44-205ENST00000549639 RNF149Q8NC42 400 aa26.89■■□□□ 1.9
USP44-205ENST00000549639 HELQQ8TDG4 1101 aa26.89■■□□□ 1.9
USP44-205ENST00000549639 CDCA3Q99618 268 aaPredicted RBP26.89■■□□□ 1.9
USP44-205ENST00000549639 SPG21Q9NZD8 308 aa26.89■■□□□ 1.9
USP44-205ENST00000549639 HCSTQ9UBK5 93 aa26.89■■□□□ 1.9
USP44-205ENST00000549639 NOL7Q9UMY1 257 aaKnown RBP26.89■■□□□ 1.9
USP44-205ENST00000549639 PLXNA4Q9HCM2 1894 aa26.89■■□□□ 1.89
USP44-205ENST00000549639 ARID2Q68CP9 1835 aa26.88■■□□□ 1.89
USP44-205ENST00000549639 CSPG5O95196 566 aa26.88■■□□□ 1.89
USP44-205ENST00000549639 GLB1LQ6UWU2 654 aa26.88■■□□□ 1.89
USP44-205ENST00000549639 ERMNQ8TAM6 284 aa26.88■■□□□ 1.89
USP44-205ENST00000549639 C1QTNF1Q9BXJ1 281 aa26.88■■□□□ 1.89
USP44-205ENST00000549639 XPNPEP1Q9NQW7 623 aa26.88■■□□□ 1.89
USP44-205ENST00000549639 BMP2KQ9NSY1 1161 aaPredicted RBP26.88■■□□□ 1.89
USP44-205ENST00000549639 POTEMA6NI47 508 aa26.87■■□□□ 1.89
USP44-205ENST00000549639 FSCN2O14926 492 aa26.87■■□□□ 1.89
USP44-205ENST00000549639 OR52Z1P0C646 297 aa26.87■■□□□ 1.89
USP44-205ENST00000549639 ALDH7A1P49419 539 aaKnown RBP26.87■■□□□ 1.89
USP44-205ENST00000549639 RARRES1P49788 294 aa26.87■■□□□ 1.89
USP44-205ENST00000549639 NCBP1Q09161 790 aaKnown RBP26.87■■□□□ 1.89
USP44-205ENST00000549639 ADGRD2Q7Z7M1 963 aa26.87■■□□□ 1.89
USP44-205ENST00000549639 POLR3CQ9BUI4 534 aaPredicted RBP26.87■■□□□ 1.89
USP44-205ENST00000549639 TLE6Q9H808 572 aa26.87■■□□□ 1.89
USP44-205ENST00000549639 NGRNQ9NPE2 291 aaKnown RBP26.87■■□□□ 1.89
USP44-205ENST00000549639 U2AF2P26368 475 aaKnown RBP eCLIP26.86■■□□□ 1.89
USP44-205ENST00000549639 AXLP30530 894 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 GTF2F1P35269 517 aaKnown RBP eCLIP26.86■■□□□ 1.89
USP44-205ENST00000549639 NRIP1P48552 1158 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 NDUFV1P49821 464 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 PTENP60484 403 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 TTC38Q5R3I4 469 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 IFNLR1Q8IU57 520 aaPredicted RBP26.86■■□□□ 1.89
USP44-205ENST00000549639 GJD3Q8N144 294 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 CNNM3Q8NE01 707 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 NACC1Q96RE7 527 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 NFKBIZQ9BYH8 718 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 MINDY3Q9H8M7 445 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 CD207Q9UJ71 328 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 DBR1Q9UK59 544 aaKnown RBP26.86■■□□□ 1.89
USP44-205ENST00000549639 PCDHB2Q9Y5E7 798 aa26.86■■□□□ 1.89
USP44-205ENST00000549639 TBX10O75333 385 aa26.85■■□□□ 1.89
USP44-205ENST00000549639 ERLIN2O94905 339 aa26.85■■□□□ 1.89
USP44-205ENST00000549639 SPATA31C1P0DKV0 1188 aa26.85■■□□□ 1.89
USP44-205ENST00000549639 MUTP22033 750 aa26.85■■□□□ 1.89
USP44-205ENST00000549639 ARL2P36404 184 aa26.85■■□□□ 1.89
USP44-205ENST00000549639 ERVFC1P60507 584 aa26.85■■□□□ 1.89
USP44-205ENST00000549639 DLX2Q07687 328 aaPredicted RBP26.85■■□□□ 1.89
USP44-205ENST00000549639 SMAD4Q13485 552 aaKnown RBP26.85■■□□□ 1.89
USP44-205ENST00000549639 ZNF174Q15697 407 aa26.85■■□□□ 1.89
USP44-205ENST00000549639 MRPL10Q7Z7H8 261 aaKnown RBP26.85■■□□□ 1.89
USP44-205ENST00000549639 CATSPER3Q86XQ3 398 aa26.85■■□□□ 1.89
USP44-205ENST00000549639 CCDC51Q96ER9 411 aa26.85■■□□□ 1.89
USP44-205ENST00000549639 CNTNAP2Q9UHC6 1331 aa26.85■■□□□ 1.89
USP44-205ENST00000549639 RPA1P27694 616 aa26.84■■□□□ 1.89
USP44-205ENST00000549639 HOXA11P31270 313 aaPredicted RBP26.84■■□□□ 1.89
USP44-205ENST00000549639 TECP42680 631 aa26.84■■□□□ 1.89
USP44-205ENST00000549639 SMAD2Q15796 467 aaKnown RBP26.84■■□□□ 1.89
USP44-205ENST00000549639 NOMO2Q5JPE7 1267 aa26.84■■□□□ 1.89
USP44-205ENST00000549639 RBM23Q86U06 439 aaKnown RBP26.84■■□□□ 1.89
USP44-205ENST00000549639 SLC39A11Q8N1S5 342 aa26.84■■□□□ 1.89
USP44-205ENST00000549639 PIGOQ8TEQ8 1089 aa26.84■■□□□ 1.89
USP44-205ENST00000549639 UBN1Q9NPG3 1134 aa26.84■■□□□ 1.89
USP44-205ENST00000549639 STK24Q9Y6E0 443 aa26.84■■□□□ 1.89
USP44-205ENST00000549639 LINC01565O15544 149 aa26.83■■□□□ 1.89
USP44-205ENST00000549639 MBTPS2O43462 519 aa26.83■■□□□ 1.89
USP44-205ENST00000549639 EYA4O95677 639 aa26.83■■□□□ 1.89
USP44-205ENST00000549639 SRGAP2BP0DMP2 458 aa26.83■■□□□ 1.89
USP44-205ENST00000549639 BMS1Q14692 1282 aaKnown RBP26.83■■□□□ 1.89
USP44-205ENST00000549639 HAUS3Q68CZ6 603 aa26.83■■□□□ 1.89
USP44-205ENST00000549639 MCPH1Q8NEM0 835 aa26.83■■□□□ 1.89
USP44-205ENST00000549639 LPPQ93052 612 aa26.83■■□□□ 1.89
USP44-205ENST00000549639 MSLNLQ96KJ4 702 aa26.83■■□□□ 1.89
USP44-205ENST00000549639 TCF25Q9BQ70 676 aa26.83■■□□□ 1.89
USP44-205ENST00000549639 ENTPD7Q9NQZ7 604 aa26.83■■□□□ 1.89
USP44-205ENST00000549639 KANSL3Q9P2N6 904 aa26.83■■□□□ 1.89
USP44-205ENST00000549639 OFD1O75665 1012 aa26.82■■□□□ 1.88
USP44-205ENST00000549639 SSTR3P32745 418 aaPredicted RBP26.82■■□□□ 1.88
USP44-205ENST00000549639 MCM2P49736 904 aa26.82■■□□□ 1.88
USP44-205ENST00000549639 BCAR1P56945 870 aa26.82■■□□□ 1.88
USP44-205ENST00000549639 COASYQ13057 564 aa26.82■■□□□ 1.88
USP44-205ENST00000549639 DUSP6Q16828 381 aa26.82■■□□□ 1.88
USP44-205ENST00000549639 NOTUMQ6P988 496 aa26.82■■□□□ 1.88
USP44-205ENST00000549639 URGCPQ8TCY9 931 aa26.82■■□□□ 1.88
USP44-205ENST00000549639 TMEM169Q96HH4 297 aa26.82■■□□□ 1.88
USP44-205ENST00000549639 POP1Q99575 1024 aaKnown RBP26.82■■□□□ 1.88
USP44-205ENST00000549639 TBC1D13Q9NVG8 400 aa26.82■■□□□ 1.88
USP44-205ENST00000549639 INO80B-WBP1J3KQ70 363 aa26.81■■□□□ 1.88
USP44-205ENST00000549639 MED24O75448 989 aa26.81■■□□□ 1.88
USP44-205ENST00000549639 NCLP19338 710 aaKnown RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms