RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 PUS7LQ9H0K6 701 aaKnown RBP12.14□□□□□ -0.47
TROAP-209ENST00000549275 IL17RBQ9NRM6 502 aa12.14□□□□□ -0.47
TROAP-209ENST00000549275 PCDHA1Q9Y5I3 950 aa12.14□□□□□ -0.47
TROAP-209ENST00000549275 BCLAF3A2AJT9 711 aaKnown RBP12.13□□□□□ -0.47
TROAP-209ENST00000549275 TSPY2A6NKD2 308 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 STAM2O75886 525 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 TDO2P48775 406 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 HSD17B4P51659 736 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 IGBP1P78318 339 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 HNRNPDQ14103 355 aaKnown RBP12.13□□□□□ -0.47
TROAP-209ENST00000549275 PGM5Q15124 567 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 C1orf228Q6PIY5 440 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 ECHDC2Q86YB7 292 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 GPKOWQ92917 476 aaPredicted RBP eCLIP12.13□□□□□ -0.47
TROAP-209ENST00000549275 KXD1Q9BQD3 176 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 TRPV5Q9NQA5 729 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 PAG1Q9NWQ8 432 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 KAT6AQ92794 2004 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
TROAP-209ENST00000549275 URB1O60287 2271 aaKnown RBP12.12□□□□□ -0.47
TROAP-209ENST00000549275 SPATA31C2B4DYI2 1134 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 ZC3H11AO75152 810 aaKnown RBP eCLIP12.12□□□□□ -0.47
TROAP-209ENST00000549275 RHOBTB1O94844 696 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 GALTP07902 379 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 TCF7P36402 384 aaPredicted RBP12.12□□□□□ -0.47
TROAP-209ENST00000549275 CSRP3P50461 194 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 CREB5Q02930 508 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 ELF2Q15723 593 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 UAP1L1Q3KQV9 507 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 PLK5Q496M5 336 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 PIP4P1Q86T03 277 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 ZNF280BQ86YH2 543 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 SAMD3Q8N6K7 520 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 MSANTD3Q96H12 275 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 RPS6KC1Q96S38 1066 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 SENP7Q9BQF6 1050 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 SMARCAD1Q9H4L7 1026 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 PRORYQ9H606 182 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 NOB1Q9ULX3 412 aaKnown RBP12.12□□□□□ -0.47
TROAP-209ENST00000549275 SDK1Q7Z5N4 2213 aa12.12□□□□□ -0.47
TROAP-209ENST00000549275 SHROOM3Q8TF72 1996 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 TEX28O15482 410 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 FIBPO43427 364 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 URODP06132 367 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 PDHBP11177 359 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
TROAP-209ENST00000549275 INSRRP14616 1297 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
TROAP-209ENST00000549275 GNAT2P19087 354 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 MLLT6P55198 1093 aaPredicted RBP12.11□□□□□ -0.47
TROAP-209ENST00000549275 ZNF543Q08ER8 600 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 FAM181AQ8N9Y4 354 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
TROAP-209ENST00000549275 BCL7CQ8WUZ0 217 aaPredicted RBP12.11□□□□□ -0.47
TROAP-209ENST00000549275 TMEM40Q8WWA1 233 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 ADAMTS14Q8WXS8 1223 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 VN1R3Q9BXE9 311 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 RXFP1Q9HBX9 757 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 SRPK3Q9UPE1 567 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 GINS2Q9Y248 185 aa12.11□□□□□ -0.47
TROAP-209ENST00000549275 F5P12259 2224 aa12.1□□□□□ -0.47
TROAP-209ENST00000549275 TEX51A0A1B0GUA7 166 aa12.1□□□□□ -0.47
TROAP-209ENST00000549275 CFBP00751 764 aa12.1□□□□□ -0.47
TROAP-209ENST00000549275 MARK3P27448 753 aa12.1□□□□□ -0.47
TROAP-209ENST00000549275 LMAN2Q12907 356 aa12.1□□□□□ -0.47
TROAP-209ENST00000549275 COLEC12Q5KU26 742 aa12.1□□□□□ -0.47
TROAP-209ENST00000549275 KRT25Q7Z3Z0 450 aa12.1□□□□□ -0.47
TROAP-209ENST00000549275 FAM228AQ86W67 206 aa12.1□□□□□ -0.47
TROAP-209ENST00000549275 ERC1Q8IUD2 1116 aa12.1□□□□□ -0.47
TROAP-209ENST00000549275 HELQQ8TDG4 1101 aa12.1□□□□□ -0.47
TROAP-209ENST00000549275 INPP4AQ96PE3 977 aaPredicted RBP12.1□□□□□ -0.47
TROAP-209ENST00000549275 A0A0U1RQF3 1178 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 B8ZZF3 427 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
TROAP-209ENST00000549275 NMT2O60551 498 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 ZMYND10O75800 440 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 SSBP05455 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
TROAP-209ENST00000549275 SNHG28P0DPA3 235 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 ZNF76P36508 570 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 CRYBB1P53674 252 aaPredicted RBP12.09□□□□□ -0.47
TROAP-209ENST00000549275 AK2P54819 239 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 SEMA3BQ13214 749 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 CDC37Q16543 378 aaPredicted RBP12.09□□□□□ -0.47
TROAP-209ENST00000549275 DGKKQ5KSL6 1271 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 GPATCH4Q5T3I0 446 aaKnown RBP12.09□□□□□ -0.47
TROAP-209ENST00000549275 GRASPQ7Z6J2 395 aaPredicted RBP12.09□□□□□ -0.47
TROAP-209ENST00000549275 ZNF598Q86UK7 904 aaKnown RBP12.09□□□□□ -0.47
TROAP-209ENST00000549275 SEPT1Q8WYJ6 367 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 IRF7Q92985 503 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 ZBTB10Q96DT7 871 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 DUSP15Q9H1R2 295 aaPredicted RBP12.09□□□□□ -0.47
TROAP-209ENST00000549275 BRD9Q9H8M2 597 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 EPB41L4AQ9HCS5 686 aaPredicted RBP12.09□□□□□ -0.47
TROAP-209ENST00000549275 KCNH3Q9ULD8 1083 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 SALL3Q9BXA9 1300 aa12.09□□□□□ -0.47
TROAP-209ENST00000549275 SOD2P04179 222 aa12.08□□□□□ -0.48
TROAP-209ENST00000549275 HNRNPA1P09651 372 aaKnown RBP eCLIP12.08□□□□□ -0.48
TROAP-209ENST00000549275 SYNPOQ8N3V7 929 aa12.08□□□□□ -0.48
TROAP-209ENST00000549275 ZNF513Q8N8E2 541 aaPredicted RBP12.08□□□□□ -0.48
TROAP-209ENST00000549275 RNF169Q8NCN4 708 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms