RNA–Protein interactions for RNA: ENST00000549076.1

ARFGAP1-222, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 2

Gene ARFGAP1, Length 913 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-222	ENST00000549076	PGBD4	Q96DM1	585 aa		18.84	■□□□□ 0.61
ARFGAP1-222	ENST00000549076	KIF2C	Q99661	725 aa		18.84	■□□□□ 0.61
ARFGAP1-222	ENST00000549076	C1QTNF1	Q9BXJ1	281 aa		18.84	■□□□□ 0.61
ARFGAP1-222	ENST00000549076	AGPAT5	Q9NUQ2	364 aa		18.84	■□□□□ 0.61
ARFGAP1-222	ENST00000549076	FAM105A	Q9NUU6	356 aa		18.84	■□□□□ 0.61
ARFGAP1-222	ENST00000549076	RNF19A	Q9NV58	838 aa		18.84	■□□□□ 0.61
ARFGAP1-222	ENST00000549076	SPG21	Q9NZD8	308 aa		18.84	■□□□□ 0.61
ARFGAP1-222	ENST00000549076	ZBTB39	O15060	712 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ZNF623	O75123	536 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ERLIN2	O94905	339 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	IL9	P15248	144 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	LTBR	P36941	435 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	NRIP1	P48552	1158 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	TRAPPC10	P48553	1259 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ALDH7A1	P49419	539 aa	Known RBP	18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ADAM15	Q13444	863 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	BMS1	Q14692	1282 aa	Known RBP	18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	LRRC55	Q6ZSA7	311 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	NOSTRIN	Q8IVI9	506 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	EFHB	Q8N7U6	833 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	MRPS27	Q92552	414 aa	Known RBP	18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	HCST	Q9UBK5	93 aa		18.83	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	WNT7A	O00755	349 aa		18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	OR52Z1	P0C646	297 aa		18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ATF7	P17544	494 aa	Predicted RBP	18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ZNF174	Q15697	407 aa		18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	TTC38	Q5R3I4	469 aa		18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	RBM23	Q86U06	439 aa	Known RBP	18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	GJD3	Q8N144	294 aa		18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	CDCA3	Q99618	268 aa	Predicted RBP	18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	TMEM60	Q9H2L4	133 aa		18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	TUFT1	Q9NNX1	390 aa		18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	NGRN	Q9NPE2	291 aa	Known RBP	18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ENTPD7	Q9NQZ7	604 aa		18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	PRKAG3	Q9UGI9	489 aa		18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	CD207	Q9UJ71	328 aa		18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	PCDHB2	Q9Y5E7	798 aa		18.82	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	POTEM	A6NI47	508 aa		18.81	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	SRGAP2B	P0DMP2	458 aa		18.81	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	TEC	P42680	631 aa		18.81	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	RNASEL	Q05823	741 aa	Known RBP	18.81	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	CLUL1	Q15846	466 aa		18.81	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ADGRD2	Q7Z7M1	963 aa		18.81	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	URGCP	Q8TCY9	931 aa		18.81	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	PIGO	Q8TEQ8	1089 aa		18.81	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	NACC1	Q96RE7	527 aa		18.81	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	LINC01565	O15544	149 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	AXL	P30530	894 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	RARRES1	P49788	294 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	PTEN	P60484	403 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ERVFC1	P60507	584 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	POU5F1B	Q06416	359 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	DLX2	Q07687	328 aa	Predicted RBP	18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	SMAD4	Q13485	552 aa	Known RBP	18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	NOMO2	Q5JPE7	1267 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	TMC7	Q7Z402	723 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	CNNM3	Q8NE01	707 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	LPP	Q93052	612 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	TMEM169	Q96HH4	297 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	POP1	Q99575	1024 aa	Known RBP	18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	TCF25	Q9BQ70	676 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	POLR3C	Q9BUI4	534 aa	Predicted RBP	18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	MINDY3	Q9H8M7	445 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	XPNPEP1	Q9NQW7	623 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	INPP5F	Q9Y2H2	1132 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ATG2A	Q2TAZ0	1938 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	PLXNA4	Q9HCM2	1894 aa		18.8	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	CNTNAP2	Q9UHC6	1331 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	INO80B-WBP1	J3KQ70	363 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	TBX10	O75333	385 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	PBX3	P40426	434 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	BCAR1	P56945	870 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	LONRF3	Q496Y0	759 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	PLPP4	Q5VZY2	271 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	HAUS3	Q68CZ6	603 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	CATSPER3	Q86XQ3	398 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	SLC39A11	Q8N1S5	342 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	MCPH1	Q8NEM0	835 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	CCDC51	Q96ER9	411 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	UBN1	Q9NPG3	1134 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	KANSL3	Q9P2N6	904 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	PCDHGC5	Q9Y5F6	944 aa		18.79	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	FSCN2	O14926	492 aa		18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	PER2	O15055	1255 aa		18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	MBTPS2	O43462	519 aa		18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	USO1	O60763	962 aa	Known RBP	18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ZC3H11A	O75152	810 aa	Known RBP eCLIP	18.78	■□□□□ 0.6	4e-8	■■■■□ 20
ARFGAP1-222	ENST00000549076	SPATA31C1	P0DKV0	1188 aa		18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ARL2	P36404	184 aa		18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	SMAD2	Q15796	467 aa	Known RBP	18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	DUSP6	Q16828	381 aa		18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	NOTUM	Q6P988	496 aa		18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	MRPL10	Q7Z7H8	261 aa	Known RBP	18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	ADHFE1	Q8IWW8	467 aa		18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	TMEM87A	Q8NBN3	555 aa		18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	FAM193B	Q96PV7	902 aa	Predicted RBP	18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	RAB34	Q9BZG1	259 aa		18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	TBC1D13	Q9NVG8	400 aa		18.78	■□□□□ 0.6
ARFGAP1-222	ENST00000549076	DBR1	Q9UK59	544 aa	Known RBP	18.78	■□□□□ 0.6

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