RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 WRAP73Q9P2S5 460 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 FRMPD4Q14CM0 1322 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 MMEP08473 750 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 GAP43P17677 238 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 RPL21P46778 160 aaKnown RBP15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 GSCP56915 257 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 DLG4P78352 724 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 MAPK7Q13164 816 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 LLGL1Q15334 1064 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 CPNE8Q86YQ8 564 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 HVCN1Q96D96 273 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 FAM129AQ9BZQ8 928 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 ADAM7Q9H2U9 754 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 FRMD4BQ9Y2L6 1034 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 RPTORQ8N122 1335 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 IGLV3-22A0A075B6J6 115 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 TISP43B9A030 160 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 CHUKO15111 745 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 EIF3DO15371 548 aaKnown RBP eCLIP15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 ATMINO43313 823 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 FGFR4P22455 802 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 EIF3BP55884 814 aaKnown RBP15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 JAG1P78504 1218 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 TTC27Q6P3X3 843 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 SH3BP5LQ7L8J4 393 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 ZNF720Q7Z2F6 126 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 FAM228AQ86W67 206 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 FAM178BQ8IXR5 827 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 EPS8L3Q8TE67 593 aaKnown RBP15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 CCT6BQ92526 530 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 GRHL1Q9NZI5 618 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 NYAP2Q9P242 653 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 CTTNBP2NLQ9P2B4 639 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 C10orf71Q711Q0 1435 aa15.28■□□□□ 0.04
RAPGEF3-218ENST00000548919 TCRBV7S2A1N4TA0A589 114 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 FTLP02792 175 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 HOXA10P31260 410 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 CIITAP33076 1130 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 CRKP46108 304 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 ODR4Q5SWX8 454 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 SYDE2Q5VT97 1194 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 MAEAQ7L5Y9 396 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 OTOP1Q7RTM1 612 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 HOOK3Q86VS8 718 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 KIAA0825Q8IV33 1275 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 PARP9Q8IXQ6 854 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 PRELID2Q8N945 189 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 ZNF317Q96PQ6 595 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 CNOT10Q9H9A5 744 aaKnown RBP15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 PTPN22Q9Y2R2 807 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 SRCAPQ6ZRS2 3230 aa15.27■□□□□ 0.04
RAPGEF3-218ENST00000548919 ANKRD62A6NC57 917 aa15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 FOSP01100 380 aaPredicted RBP15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 PTGIRP43119 386 aa15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 VPS72Q15906 364 aa15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 CCDC38Q502W7 563 aa15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 LRCH2Q5VUJ6 765 aa15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 HS2ST1Q7LGA3 356 aa15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 CEP57Q86XR8 500 aa15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 SCLT1Q96NL6 688 aa15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 NAP1L3Q99457 506 aaPredicted RBP15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 AGPAT1Q99943 283 aa15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 PCIF1Q9H4Z3 704 aa15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 UBE2TQ9NPD8 197 aaPredicted RBP15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 ACP6Q9NPH0 428 aa15.27■□□□□ 0.03
RAPGEF3-218ENST00000548919 ANKRD63C9JTQ0 380 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 EXOC3O60645 756 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 NUDT17P0C025 328 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 RDXP35241 583 aaKnown RBP15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 IFNAR2P48551 515 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 RBM5P52756 815 aaKnown RBP eCLIP15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 ARHGEF19Q8IW93 802 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 ATXN2LQ8WWM7 1075 aaKnown RBP15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 SUGT1Q9Y2Z0 365 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 SIPA1L1O43166 1804 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 RGS16O15492 202 aaPredicted RBP15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 CFBP00751 764 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 MESDQ14696 234 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 SYCP3Q8IZU3 236 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 BTBD6Q96KE9 485 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 PRMT1Q99873 361 aaKnown RBP15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 CCDC113Q9H0I3 377 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 FAM198AQ9UFP1 575 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 DIS3Q9Y2L1 958 aaKnown RBP15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
RAPGEF3-218ENST00000548919 FAM187AA6NFU0 413 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 G3V3G9 751 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 MMP13P45452 471 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 DHX34Q14147 1143 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 KIF22Q14807 665 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 SNCBQ16143 134 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 DCAF8Q5TAQ9 597 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 HHIPL2Q6UWX4 724 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 SP8Q8IXZ3 490 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 LRRC34Q8IZ02 419 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 LMO3Q8TAP4 145 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 KAT5Q92993 513 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 SGSM3Q96HU1 749 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 CRAMP1Q96RY5 1269 aa15.25■□□□□ 0.03
RAPGEF3-218ENST00000548919 DBNDD1Q9H9R9 158 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms