RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 HCFC2Q9Y5Z7 792 aa17.07■□□□□ 0.32
SNX29P1-201ENST00000548357 STK36Q9NRP7 1315 aa17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 EPB41L2O43491 1005 aaKnown RBP17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 PPM1AP35813 382 aa17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 SPIRE1Q08AE8 756 aa17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 TWF2Q6IBS0 349 aaKnown RBP17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 ZNF280BQ86YH2 543 aa17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 C12orf76Q8N812 135 aaPredicted RBP17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 MRPL43Q8N983 215 aaKnown RBP17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 SMOC2Q9H3U7 446 aa17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 POMKQ9H5K3 350 aa17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 NGRNQ9NPE2 291 aaKnown RBP17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 FAM105AQ9NUU6 356 aa17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 RGL1Q9NZL6 768 aa17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 CACNA1HO95180 2353 aa17.06■□□□□ 0.32
SNX29P1-201ENST00000548357 MYO15AQ9UKN7 3530 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 VPS13AQ96RL7 3174 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 PFKFB2O60825 505 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 OFD1O75665 1012 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 EPCAMP16422 314 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 SFPQP23246 707 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 QARSP47897 775 aaKnown RBP17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 SLC11A1P49279 550 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 NR5A1Q13285 461 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 SMC1AQ14683 1233 aaKnown RBP17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 UBXN11Q5T124 520 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 GALNT17Q6IS24 598 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 AGMOQ6ZNB7 445 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 CATSPER4Q7RTX7 472 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 NEK8Q86SG6 692 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 ZNF410Q86VK4 478 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 ZNF710Q8N1W2 664 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 TNFRSF25Q93038 417 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 ASIC4Q96FT7 647 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 TRAIPQ9BWF2 469 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 DHX33Q9H6R0 707 aaKnown RBP17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 CHST12Q9NRB3 414 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 DACT1Q9NYF0 836 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 PUF60Q9UHX1 559 aaKnown RBP17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 COL4A3BPQ9Y5P4 624 aa17.05■□□□□ 0.32
SNX29P1-201ENST00000548357 CCDC194A0A1B0GVG4 234 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 CCNT1O60563 726 aaKnown RBP17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 DDHD2O94830 711 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 PDGFBP01127 241 aaPredicted RBP17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 HOXA11P31270 313 aaPredicted RBP17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 CA8P35219 290 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 FOSBP53539 338 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 AK2P54819 239 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 VCPP55072 806 aaKnown RBP17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 KRT17Q04695 432 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 CTTNQ14247 550 aaKnown RBP17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 NCAPH2Q6IBW4 605 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 VPS52Q8N1B4 723 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 NECAB1Q8N987 351 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 PRPF31Q8WWY3 499 aaKnown RBP17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 DYDC2Q96IM9 177 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 CEP170P1Q96L14 293 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 LXNQ9BS40 222 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 MRPL9Q9BYD2 267 aaKnown RBP17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 GBP3Q9H0R5 595 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 SLKQ9H2G2 1235 aaPredicted RBP17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 XPNPEP1Q9NQW7 623 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 AGPAT5Q9NUQ2 364 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 VWA8A3KMH1 1905 aa17.04■□□□□ 0.32
SNX29P1-201ENST00000548357 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 C2CD4DB7Z1M9 353 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 CXCL14O95715 111 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 GALTP07902 379 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 SRGAP2CP0DJJ0 459 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 MRE11P49959 708 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 DNM2P50570 870 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 CYP4A11Q02928 519 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 ST3GAL1Q11201 340 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 NOMO2Q5JPE7 1267 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 RARS2Q5T160 578 aaKnown RBP17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 PPP4R3AQ6IN85 833 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 BMP8AQ7Z5Y6 402 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 PBXIP1Q96AQ6 731 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 IGSF21Q96ID5 467 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 PCDHB2Q9Y5E7 798 aa17.03■□□□□ 0.32
SNX29P1-201ENST00000548357 DMDP11532 3685 aa17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 A0A087WWV3 80 aa17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 ZNF623O75123 536 aa17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 P4HBP07237 508 aaKnown RBP17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 ALDH7A1P49419 539 aaKnown RBP17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 LAMTOR4Q0VGL1 99 aa17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 EMC2Q15006 297 aa17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 PTPN21Q16825 1174 aa17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 CPLX2Q6PUV4 134 aaKnown RBP17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 SLC22A17Q8WUG5 538 aa17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 CASP10Q92851 521 aa17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 TMEM169Q96HH4 297 aa17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 FAM20AQ96MK3 541 aa17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 TSHZ2Q9NRE2 1034 aa17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 ORC3Q9UBD5 711 aaPredicted RBP17.02■□□□□ 0.32
SNX29P1-201ENST00000548357 CFAP54Q96N23 3096 aa17.02■□□□□ 0.31
SNX29P1-201ENST00000548357 F8W810 466 aa17.01■□□□□ 0.31
SNX29P1-201ENST00000548357 JAK2O60674 1132 aa17.01■□□□□ 0.31
SNX29P1-201ENST00000548357 CTSAP10619 480 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms