RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 EFNA5P52803 228 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 WDR5P61964 334 aaKnown RBP12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 MBTD1Q05BQ5 628 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 GIT2Q14161 759 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 TCTN1Q2MV58 587 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 CATSPER4Q7RTX7 472 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 DEPTORQ8TB45 409 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 DDX12PQ92771 950 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 SLC9A7Q96T83 725 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 NTPCRQ9BSD7 190 aaKnown RBP12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 TMX1Q9H3N1 280 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 MINDY3Q9H8M7 445 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 PARVGQ9HBI0 331 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 SLC4A7Q9Y6M7 1214 aa12.57□□□□□ -0.4
CALCOCO1-208ENST00000547988 CCDC169A6NNP5 214 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 H0YCG3 227 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 INO80B-WBP1J3KQ70 363 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 ACTN4O43707 911 aaKnown RBP12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 CSDE1O75534 798 aaKnown RBP12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 ERLIN2O94905 339 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 FAM13AO94988 1023 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 SCP2P22307 547 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 NPTX2P47972 431 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 SMTNP53814 917 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 PEX3P56589 373 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 CNNM4Q6P4Q7 775 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 DYMQ7RTS9 669 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 PHOSPHO2Q8TCD6 241 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 SPIRE2Q8WWL2 714 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 DNAJC19Q96DA6 116 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 PRIMPOLQ96LW4 560 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 GOLPH3LQ9H4A5 285 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 POLD4Q9HCU8 107 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 KMT5AQ9NQR1 393 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 CHST12Q9NRB3 414 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 C1orf112Q9NSG2 853 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 AGPAT5Q9NUQ2 364 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 PRMT7Q9NVM4 692 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 DACT1Q9NYF0 836 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 CXXC1Q9P0U4 656 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 ARHGAP28Q9P2N2 729 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 COL4A6Q14031 1691 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 LAMA2P24043 3122 aaKnown RBP12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 ADGRA3Q8IWK6 1321 aa12.56□□□□□ -0.4
CALCOCO1-208ENST00000547988 ANK1P16157 1881 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 FRMD3A2A2Y4 597 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 DENND3A2RUS2 1198 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 SFI1A8K8P3 1242 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 AMHP03971 560 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 MYL1P05976 194 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 ZSCAN20P17040 1043 aaPredicted RBP12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 GAP43P17677 238 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 FGFR4P22455 802 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 AXLP30530 894 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 ABCD1P33897 745 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 NCBP1Q09161 790 aaKnown RBP12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 DSC3Q14574 896 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 MAPK6Q16659 721 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 FAM187BQ17R55 369 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 PPP4R3CPQ6ZMV5 832 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 MYCT1Q8N699 235 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 SLC17A8Q8NDX2 589 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 LINC01599Q8WXQ3 324 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 KCNN1Q92952 543 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 CCDC34Q96HJ3 373 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 GBP4Q96PP9 640 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 ADAM2Q99965 735 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 C7orf25Q9BPX7 421 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 TRIM9Q9C026 710 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 CCDC113Q9H0I3 377 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 FZD8Q9H461 694 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 TMEM134Q9H6X4 195 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 RGS18Q9NS28 235 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 SEL1LQ9UBV2 794 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 SERTAD1Q9UHV2 236 aa12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 PIN4Q9Y237 131 aaKnown RBP12.55□□□□□ -0.4
CALCOCO1-208ENST00000547988 K7ERI5 159 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 ENPP3O14638 875 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 MGEA5O60502 916 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 TSPAN1O60635 241 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 ZNF202O95125 648 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 MAPTP10636 758 aaKnown RBP12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 ATP2A2P16615 1042 aaKnown RBP12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 NCKAP1LP55160 1127 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 UBE2HP62256 183 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 DEFB103AP81534 67 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 FAM160A1Q05DH4 1040 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 LRIT3Q3SXY7 679 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 LONRF3Q496Y0 759 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 SLC24A5Q71RS6 500 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 RTN4RL1Q86UN2 441 aaPredicted RBP12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 FAM178BQ8IXR5 827 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 CCDC65Q8IXS2 484 aa12.54□□□□□ -0.4
CALCOCO1-208ENST00000547988 FMR1NBQ8N0W7 255 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms