RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 TMEM31Q5JXX7 168 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 TMEM173Q86WV6 379 aaPredicted RBP23.93■■□□□ 1.42
USP44-204ENST00000547951 SLC39A11Q8N1S5 342 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 PSPC1Q8WXF1 523 aaKnown RBP23.93■■□□□ 1.42
USP44-204ENST00000547951 MTMR9Q96QG7 549 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 KIF2CQ99661 725 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 HSD17B14Q9BPX1 270 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 TRAIPQ9BWF2 469 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 TTC12Q9H892 705 aaPredicted RBP23.93■■□□□ 1.42
USP44-204ENST00000547951 AGPAT5Q9NUQ2 364 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 FAM105AQ9NUU6 356 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 SPG21Q9NZD8 308 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 PRKAG3Q9UGI9 489 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 PCDHA12Q9UN75 941 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 LZTS1Q9Y250 596 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 B4GALT3O60512 393 aa23.92■■□□□ 1.42
USP44-204ENST00000547951 NEMFO60524 1076 aa23.92■■□□□ 1.42
USP44-204ENST00000547951 EYA4O95677 639 aa23.92■■□□□ 1.42
USP44-204ENST00000547951 ATP2B1P20020 1258 aa23.92■■□□□ 1.42
USP44-204ENST00000547951 TXKP42681 527 aa23.92■■□□□ 1.42
USP44-204ENST00000547951 TRIM29Q14134 588 aa23.92■■□□□ 1.42
USP44-204ENST00000547951 SMRP1Q8NCR6 262 aa23.92■■□□□ 1.42
USP44-204ENST00000547951 INO80BQ9C086 356 aaPredicted RBP23.92■■□□□ 1.42
USP44-204ENST00000547951 ENTPD7Q9NQZ7 604 aa23.92■■□□□ 1.42
USP44-204ENST00000547951 LIMCH1Q9UPQ0 1083 aa23.92■■□□□ 1.42
USP44-204ENST00000547951 INPP5FQ9Y2H2 1132 aa23.92■■□□□ 1.42
USP44-204ENST00000547951 POTEMA6NI47 508 aa23.91■■□□□ 1.42
USP44-204ENST00000547951 HOXA11P31270 313 aaPredicted RBP23.91■■□□□ 1.42
USP44-204ENST00000547951 BCAR1P56945 870 aa23.91■■□□□ 1.42
USP44-204ENST00000547951 COASYQ13057 564 aa23.91■■□□□ 1.42
USP44-204ENST00000547951 UBXN11Q5T124 520 aa23.91■■□□□ 1.42
USP44-204ENST00000547951 OTUD6AQ7L8S5 288 aa23.91■■□□□ 1.42
USP44-204ENST00000547951 FERMT3Q86UX7 667 aa23.91■■□□□ 1.42
USP44-204ENST00000547951 RNF149Q8NC42 400 aa23.91■■□□□ 1.42
USP44-204ENST00000547951 BCL7CQ8WUZ0 217 aaPredicted RBP23.91■■□□□ 1.42
USP44-204ENST00000547951 USP15Q9Y4E8 981 aaPredicted RBP23.91■■□□□ 1.42
USP44-204ENST00000547951 GPR37L1O60883 481 aa23.9■■□□□ 1.42
USP44-204ENST00000547951 MCM7P33993 719 aa23.9■■□□□ 1.42
USP44-204ENST00000547951 AFF1P51825 1210 aaKnown RBP23.9■■□□□ 1.42
USP44-204ENST00000547951 KCNC3Q14003 757 aa23.9■■□□□ 1.42
USP44-204ENST00000547951 C8orf34Q49A92 452 aa23.9■■□□□ 1.42
USP44-204ENST00000547951 LLGL2Q6P1M3 1020 aa23.9■■□□□ 1.42
USP44-204ENST00000547951 TBC1D13Q9NVG8 400 aa23.9■■□□□ 1.42
USP44-204ENST00000547951 PPME1Q9Y570 386 aa23.9■■□□□ 1.42
USP44-204ENST00000547951 PCDHB2Q9Y5E7 798 aa23.9■■□□□ 1.42
USP44-204ENST00000547951 ZC3H11AO75152 810 aaKnown RBP eCLIP23.89■■□□□ 1.41
USP44-204ENST00000547951 OFD1O75665 1012 aa23.89■■□□□ 1.41
USP44-204ENST00000547951 PPM1AP35813 382 aa23.89■■□□□ 1.41
USP44-204ENST00000547951 AGMOQ6ZNB7 445 aa23.89■■□□□ 1.41
USP44-204ENST00000547951 ASAP3Q8TDY4 903 aa23.89■■□□□ 1.41
USP44-204ENST00000547951 PIGOQ8TEQ8 1089 aa23.89■■□□□ 1.41
USP44-204ENST00000547951 MTRQ99707 1265 aa23.89■■□□□ 1.41
USP44-204ENST00000547951 MRPL9Q9BYD2 267 aaKnown RBP23.89■■□□□ 1.41
USP44-204ENST00000547951 DNAJB4Q9UDY4 337 aa23.89■■□□□ 1.41
USP44-204ENST00000547951 PUF60Q9UHX1 559 aaKnown RBP23.89■■□□□ 1.41
USP44-204ENST00000547951 ZNF623O75123 536 aa23.88■■□□□ 1.41
USP44-204ENST00000547951 LYPLA2O95372 231 aa23.88■■□□□ 1.41
USP44-204ENST00000547951 NOMO2Q5JPE7 1267 aa23.88■■□□□ 1.41
USP44-204ENST00000547951 PDE12Q6L8Q7 609 aaKnown RBP23.88■■□□□ 1.41
USP44-204ENST00000547951 GLB1LQ6UWU2 654 aa23.88■■□□□ 1.41
USP44-204ENST00000547951 TMC7Q7Z402 723 aa23.88■■□□□ 1.41
USP44-204ENST00000547951 SRGAP1Q7Z6B7 1085 aa23.88■■□□□ 1.41
USP44-204ENST00000547951 APOL5Q9BWW9 433 aa23.88■■□□□ 1.41
USP44-204ENST00000547951 GBP3Q9H0R5 595 aa23.88■■□□□ 1.41
USP44-204ENST00000547951 NRDE2Q9H7Z3 1164 aa23.88■■□□□ 1.41
USP44-204ENST00000547951 SPATA31C1P0DKV0 1188 aa23.87■■□□□ 1.41
USP44-204ENST00000547951 KRT17Q04695 432 aa23.87■■□□□ 1.41
USP44-204ENST00000547951 ZNF280BQ86YH2 543 aa23.87■■□□□ 1.41
USP44-204ENST00000547951 EXOC8Q8IYI6 725 aa23.87■■□□□ 1.41
USP44-204ENST00000547951 TCP11Q8WWU5 503 aa23.87■■□□□ 1.41
USP44-204ENST00000547951 AUTS2Q8WXX7 1259 aa23.87■■□□□ 1.41
USP44-204ENST00000547951 C8orf76Q96K31 380 aa23.87■■□□□ 1.41
USP44-204ENST00000547951 CDCA3Q99618 268 aaPredicted RBP23.87■■□□□ 1.41
USP44-204ENST00000547951 MUTYHQ9UIF7 546 aa23.87■■□□□ 1.41
USP44-204ENST00000547951 CDH22Q9UJ99 828 aa23.87■■□□□ 1.41
USP44-204ENST00000547951 C2orf71A6NGG8 1288 aa23.86■■□□□ 1.41
USP44-204ENST00000547951 DCXO43602 365 aa23.86■■□□□ 1.41
USP44-204ENST00000547951 GAS2O43903 313 aaKnown RBP23.86■■□□□ 1.41
USP44-204ENST00000547951 EIF5BO60841 1220 aaKnown RBP23.86■■□□□ 1.41
USP44-204ENST00000547951 CENPBP07199 599 aaPredicted RBP23.86■■□□□ 1.41
USP44-204ENST00000547951 ALDH7A1P49419 539 aaKnown RBP23.86■■□□□ 1.41
USP44-204ENST00000547951 RARRES1P49788 294 aa23.86■■□□□ 1.41
USP44-204ENST00000547951 RAB27AP51159 221 aa23.86■■□□□ 1.41
USP44-204ENST00000547951 CAPSQ13938 189 aa23.86■■□□□ 1.41
USP44-204ENST00000547951 ZNF174Q15697 407 aa23.86■■□□□ 1.41
USP44-204ENST00000547951 MRPL10Q7Z7H8 261 aaKnown RBP23.86■■□□□ 1.41
USP44-204ENST00000547951 CPB2Q96IY4 423 aa23.86■■□□□ 1.41
USP44-204ENST00000547951 VN1R3Q9BXE9 311 aa23.86■■□□□ 1.41
USP44-204ENST00000547951 EIF2AQ9BY44 585 aaKnown RBP23.86■■□□□ 1.41
USP44-204ENST00000547951 NGRNQ9NPE2 291 aaKnown RBP23.86■■□□□ 1.41
USP44-204ENST00000547951 ANKEF1Q9NU02 776 aa23.86■■□□□ 1.41
USP44-204ENST00000547951 TSPAN1O60635 241 aa23.85■■□□□ 1.41
USP44-204ENST00000547951 MED24O75448 989 aa23.85■■□□□ 1.41
USP44-204ENST00000547951 DDHD2O94830 711 aa23.85■■□□□ 1.41
USP44-204ENST00000547951 GALTP07902 379 aa23.85■■□□□ 1.41
USP44-204ENST00000547951 SKIP12755 728 aa23.85■■□□□ 1.41
USP44-204ENST00000547951 TECP42680 631 aa23.85■■□□□ 1.41
USP44-204ENST00000547951 SLC11A1P49279 550 aa23.85■■□□□ 1.41
USP44-204ENST00000547951 PTENP60484 403 aa23.85■■□□□ 1.41
USP44-204ENST00000547951 SYCE2Q6PIF2 218 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms