RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 ARHGEF35A5YM69 484 aa18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 SFI1A8K8P3 1242 aa18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 CETN3O15182 167 aa18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 ABL1P00519 1130 aa18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 CYLC1P35663 651 aaPredicted RBP18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 MARSP56192 900 aaKnown RBP18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 CDK17Q00537 523 aa18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 ELF2Q15723 593 aa18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 KNOP1Q1ED39 458 aaKnown RBP18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 CYFIP1Q7L576 1253 aa18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 C4orf19Q8IY42 314 aa18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 SMAP1Q8IYB5 467 aaPredicted RBP18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 CARD6Q9BX69 1037 aa18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 NHEJ1Q9H9Q4 299 aaPredicted RBP18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 PHF24Q9UPV7 400 aa18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 MRFAP1Q9Y605 127 aa18.12■□□□□ 0.49
CHMP1A-204ENST00000547687 DYNC1LI2O43237 492 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 MYBP10242 640 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 GAP43P17677 238 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 YWHABP31946 246 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 ACLYP53396 1101 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 ACTR2P61160 394 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 KRT83P78385 493 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 HABP4Q5JVS0 413 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 GNASQ5JWF2 1037 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 TLK2Q86UE8 772 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 CCDC170Q8IYT3 715 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 KLHDC9Q8NEP7 349 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 MORC4Q8TE76 937 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 MPHOSPH6Q99547 160 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 SH2D3AQ9BRG2 576 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 GNEQ9Y223 722 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 TRAF3IP3Q9Y228 551 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 MYH11P35749 1972 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 TMEM150BA6NC51 233 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 EPHB6O15197 1021 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 PRPF6O94906 941 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 UBA1P22314 1058 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 RARRES1P49788 294 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 ERCC6LQ2NKX8 1250 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 UTP14CQ5TAP6 766 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 CCSAPQ6IQ19 270 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 TRIM59Q8IWR1 403 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 KCND2Q9NZV8 630 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 MYO1AQ9UBC5 1043 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 GABBR1Q9UBS5 961 aa18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 DBR1Q9UK59 544 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.11■□□□□ 0.49
CHMP1A-204ENST00000547687 CALUO43852 315 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 ASGR1P07306 291 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 PSAPP07602 524 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 HNRNPH3P31942 346 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 HOXD13P35453 343 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 GJA9P57773 515 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 KCNMA1Q12791 1236 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 SWSAP1Q6NVH7 229 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 PADI6Q6TGC4 694 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 ABHD15Q6UXT9 468 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 SLC35F6Q8N357 371 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 CCDC155Q8N6L0 562 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 NEK11Q8NG66 645 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 VTA1Q9NP79 307 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 PLAGL2Q9UPG8 496 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 MYH9P35579 1960 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 EIF3CLB5ME19 914 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 PDXKO00764 312 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 FAM13AO94988 1023 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 GCNT3O95395 438 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 NR2F2P24468 414 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 BMT2Q1RMZ1 405 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 CCDC60Q8IWA6 550 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 COPS5Q92905 334 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 EIF3CQ99613 913 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 EDEM3Q9BZQ6 932 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 UPF3AQ9H1J1 476 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 HAUS4Q9H6D7 363 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 PRDM5Q9NQX1 630 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 OLFML3Q9NRN5 406 aa18.1■□□□□ 0.49
CHMP1A-204ENST00000547687 CTAGE9A4FU28 777 aa18.09■□□□□ 0.49
CHMP1A-204ENST00000547687 ZNF862O60290 1169 aa18.09■□□□□ 0.49
CHMP1A-204ENST00000547687 GUCY2CP25092 1073 aa18.09■□□□□ 0.49
CHMP1A-204ENST00000547687 MAGEA10P43363 369 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-204ENST00000547687 LY6KQ17RY6 165 aa18.09■□□□□ 0.49
CHMP1A-204ENST00000547687 MYCT1Q8N699 235 aa18.09■□□□□ 0.49
CHMP1A-204ENST00000547687 UBXN4Q92575 508 aa18.09■□□□□ 0.49
CHMP1A-204ENST00000547687 VTI1AQ96AJ9 217 aa18.09■□□□□ 0.49
CHMP1A-204ENST00000547687 SPC25Q9HBM1 224 aa18.09■□□□□ 0.49
CHMP1A-204ENST00000547687 LTBP2Q14767 1821 aa18.09■□□□□ 0.49
CHMP1A-204ENST00000547687 EFCAB8A8MWE9 144 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 PQBP1O60828 265 aaKnown RBP18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 IPO7O95373 1038 aaKnown RBP18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 TGFB3P10600 412 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 NPEPPSP55786 919 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 PPP2R3AQ06190 1150 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 PLA2G4FQ68DD2 849 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 IQSEC1Q6DN90 963 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 ZNF662Q6ZS27 426 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 ANO5Q75V66 913 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 RRAGAQ7L523 313 aa18.08■□□□□ 0.49
CHMP1A-204ENST00000547687 ATP6V0A1Q93050 837 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms