RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	PCDHB6	Q9Y5E3	794 aa		6.18	□□□□□ -1.42
LGR5-204	ENST00000547310	PPP2R3B	Q9Y5P8	575 aa		6.18	□□□□□ -1.42
LGR5-204	ENST00000547310	MATN2	O00339	956 aa		6.17	□□□□□ -1.42
LGR5-204	ENST00000547310	TBR1	Q16650	682 aa		6.17	□□□□□ -1.42
LGR5-204	ENST00000547310	RNF151	Q2KHN1	245 aa		6.17	□□□□□ -1.42
LGR5-204	ENST00000547310	LMBR1	Q8WVP7	490 aa		6.17	□□□□□ -1.42
LGR5-204	ENST00000547310	CFHR4	Q92496	578 aa		6.17	□□□□□ -1.42
LGR5-204	ENST00000547310	NEIL1	Q96FI4	390 aa	Predicted RBP	6.17	□□□□□ -1.42
LGR5-204	ENST00000547310	NOL10	Q9BSC4	688 aa	Known RBP	6.17	□□□□□ -1.42
LGR5-204	ENST00000547310	KIAA1683	Q9H0B3	1180 aa		6.17	□□□□□ -1.42
LGR5-204	ENST00000547310	KLC2	Q9H0B6	622 aa		6.17	□□□□□ -1.42
LGR5-204	ENST00000547310	COL4A3BP	Q9Y5P4	624 aa		6.17	□□□□□ -1.42
LGR5-204	ENST00000547310	WDR33	Q9C0J8	1336 aa	Known RBP	6.17	□□□□□ -1.42
LGR5-204	ENST00000547310	ANKRD62	A6NC57	917 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	PRKD3	O94806	890 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	SEC24D	O94855	1032 aa	Predicted RBP	6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	PCDH8	O95206	1070 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	CDK11B	P21127	795 aa	Known RBP	6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	ENPP1	P22413	925 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	RRAD	P55042	308 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	RAC3	P60763	192 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	ERVK-21	P61565	698 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	FHL2	Q14192	279 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	PTPRO	Q16827	1216 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	PITRM1	Q5JRX3	1037 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	CLEC14A	Q86T13	490 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	AHCYL2	Q96HN2	611 aa	Known RBP	6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	VTA1	Q9NP79	307 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	SLC5A4	Q9NY91	659 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	PRSS50	Q9UI38	385 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	NR2E1	Q9Y466	385 aa		6.16	□□□□□ -1.42
LGR5-204	ENST00000547310	ALG1L2	C9J202	215 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	NRP2	O60462	931 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	FSBP	O95073	299 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	ADCY7	P51828	1080 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	GAGE13	Q4V321	117 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	LRCH2	Q5VUJ6	765 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	UNC5B	Q8IZJ1	945 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	OR14C36	Q8NHC7	312 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	GAB3	Q8WWW8	586 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	RABGGTA	Q92696	567 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	RAX2	Q96IS3	184 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	LMF1	Q96S06	567 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	ANO3	Q9BYT9	981 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	SLC6A15	Q9H2J7	730 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	OAZ3	Q9UMX2	235 aa		6.15	□□□□□ -1.42
LGR5-204	ENST00000547310	C2orf78	A6NCI8	922 aa		6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	NPEPPSL1	A6NEC2	478 aa		6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	CR2	P20023	1033 aa		6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	CDKN1C	P49918	316 aa	Predicted RBP	6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	MRPS9	P82933	396 aa	Known RBP	6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	DUSP8	Q13202	625 aa		6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	ADAM15	Q13444	863 aa		6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	PRPF38A	Q8NAV1	312 aa	Known RBP	6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	DNER	Q8NFT8	737 aa		6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	CD248	Q9HCU0	757 aa		6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	PUF60	Q9UHX1	559 aa	Known RBP	6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	MAGEL2	Q9UJ55	1249 aa		6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	NOP58	Q9Y2X3	529 aa	Known RBP	6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	ZNF536	O15090	1300 aa		6.14	□□□□□ -1.43
LGR5-204	ENST00000547310	PATE3	B3GLJ2	98 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	GPR42	O15529	346 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	DAPK3	O43293	454 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	MTSS1	O43312	755 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	SLC26A4	O43511	780 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	GPR3	P46089	330 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	ADAM8	P78325	824 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	TRIM25	Q14258	630 aa	Known RBP	6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	UGT8	Q16880	541 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	INAVA	Q3KP66	663 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	CCDC62	Q6P9F0	684 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	LIMS2	Q7Z4I7	341 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	PLA2G15	Q8NCC3	412 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	CHFR	Q96EP1	664 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	GPATCH3	Q96I76	525 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	PAWR	Q96IZ0	340 aa	Known RBP	6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	FDXACB1	Q9BRP7	624 aa	Predicted RBP	6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	NELFA	Q9H3P2	528 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	PRDM12	Q9H4Q4	367 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	C14orf119	Q9NWQ9	140 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	DNAI1	Q9UI46	699 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	CDY2A	Q9Y6F7	541 aa		6.13	□□□□□ -1.43
LGR5-204	ENST00000547310	TRIM75P	A6NK02	468 aa		6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	GOLGA8A	A7E2F4	631 aa		6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	GOLGA8B	A8MQT2	603 aa		6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	CLEC2L	P0C7M8	214 aa		6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	GAA	P10253	952 aa		6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	MTHFD2	P13995	350 aa		6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	NCL	P19338	710 aa	Known RBP	6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	XPA	P23025	273 aa	Predicted RBP	6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	RPS19	P39019	145 aa	Known RBP	6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	KIR2DL3	P43628	341 aa		6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	NRG3	P56975	720 aa		6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	MEF2A	Q02078	507 aa	Predicted RBP	6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	CT83	Q5H943	113 aa		6.12	□□□□□ -1.43
LGR5-204	ENST00000547310	KCNK18	Q7Z418	384 aa		6.12	□□□□□ -1.43

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