RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 C9IYK1 514 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 RBAK-RBAKDNI3L0D1 243 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 SOX1O00570 391 aaPredicted RBP18.57■□□□□ 0.56
CCDC38-203ENST00000546803 STAG3L1P0CL83 205 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 PLS3P13797 630 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 AXLP30530 894 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 NPTX2P47972 431 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 PEX3P56589 373 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 FAM189BP81408 668 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 RAD51AP2Q09MP3 1159 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 E2F4Q16254 413 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 FAM187BQ17R55 369 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 NPAS4Q8IUM7 802 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 SPIRE2Q8WWL2 714 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 PRIMPOLQ96LW4 560 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 IPO9Q96P70 1041 aaKnown RBP18.57■□□□□ 0.56
CCDC38-203ENST00000546803 RAD9AQ99638 391 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 REEP2Q9BRK0 252 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 NTPCRQ9BSD7 190 aaKnown RBP18.57■□□□□ 0.56
CCDC38-203ENST00000546803 TRAIPQ9BWF2 469 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 PBX4Q9BYU1 374 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 LRRC27Q9C0I9 530 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 MAGEF1Q9HAY2 307 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 PRMT7Q9NVM4 692 aaPredicted RBP18.57■□□□□ 0.56
CCDC38-203ENST00000546803 LARSQ9P2J5 1176 aaKnown RBP18.57■□□□□ 0.56
CCDC38-203ENST00000546803 KCNH3Q9ULD8 1083 aa18.57■□□□□ 0.56
CCDC38-203ENST00000546803 PIN4Q9Y237 131 aaKnown RBP18.57■□□□□ 0.56
CCDC38-203ENST00000546803 NPHP3-ACAD11A0A0J9YXS1 232 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 CCDC169A6NNP5 214 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 POLR2DO15514 142 aaKnown RBP18.56■□□□□ 0.56
CCDC38-203ENST00000546803 TLL1O43897 1013 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 FXR1P51114 621 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCDC38-203ENST00000546803 SMTNP53814 917 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 GIT2Q14161 759 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 MAPK6Q16659 721 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 DHX58Q96C10 678 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 CCDC51Q96ER9 411 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 TNMDQ9H2S6 317 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 FZD8Q9H461 694 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 ELAC1Q9H777 363 aaKnown RBP18.56■□□□□ 0.56
CCDC38-203ENST00000546803 GDPD2Q9HCC8 539 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 KMT5AQ9NQR1 393 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 INSL6Q9Y581 213 aa18.56■□□□□ 0.56
CCDC38-203ENST00000546803 TET1Q8NFU7 2136 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 TMEM265A0A087WTH1 108 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 A0A0U1RQF3 1178 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 FAM237AA0A1B0GTK4 181 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 SFI1A8K8P3 1242 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 H0YCG3 227 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 TSPAN1O60635 241 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 TBCAO75347 108 aaKnown RBP18.55■□□□□ 0.56
CCDC38-203ENST00000546803 FAM13AO94988 1023 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 UPP2O95045 317 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 SKIP12755 728 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 SCP2P22307 547 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 DNAJB2P25686 324 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 HOXA11P31270 313 aaPredicted RBP18.55■□□□□ 0.56
CCDC38-203ENST00000546803 PBX2P40425 430 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 ZNF131P52739 623 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 RABGGTBP53611 331 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 AMPD3Q01432 767 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 CSPP1Q1MSJ5 1256 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 TWF2Q6IBS0 349 aaKnown RBP18.55■□□□□ 0.56
CCDC38-203ENST00000546803 CRIPAKQ8N1N5 446 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 DDX12PQ92771 950 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 TIFAQ96CG3 184 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 LRCH3Q96II8 777 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 TMEM134Q9H6X4 195 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 PARVGQ9HBI0 331 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 KBTBD4Q9NVX7 518 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 TMEM161AQ9NX61 479 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 ARHGAP28Q9P2N2 729 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 USP25Q9UHP3 1055 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 LRFN2Q9ULH4 789 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 PCDHB7Q9Y5E2 793 aa18.55■□□□□ 0.56
CCDC38-203ENST00000546803 EVPLQ92817 2033 aa18.54■□□□□ 0.56
CCDC38-203ENST00000546803 MYMKA6NI61 221 aa18.54■□□□□ 0.56
CCDC38-203ENST00000546803 K7ERI5 159 aa18.54■□□□□ 0.56
CCDC38-203ENST00000546803 RAB27AP51159 221 aa18.54■□□□□ 0.56
CCDC38-203ENST00000546803 HTRA4P83105 476 aaPredicted RBP18.54■□□□□ 0.56
CCDC38-203ENST00000546803 CACNB1Q02641 598 aaPredicted RBP18.54■□□□□ 0.56
CCDC38-203ENST00000546803 AMHR2Q16671 573 aa18.54■□□□□ 0.56
CCDC38-203ENST00000546803 FAM117BQ6P1L5 589 aa18.54■□□□□ 0.56
CCDC38-203ENST00000546803 NOTUMQ6P988 496 aa18.54■□□□□ 0.56
CCDC38-203ENST00000546803 TMCO2Q7Z6W1 182 aaPredicted RBP18.54■□□□□ 0.56
CCDC38-203ENST00000546803 KCNN1Q92952 543 aa18.54■□□□□ 0.56
CCDC38-203ENST00000546803 YME1L1Q96TA2 773 aa18.54■□□□□ 0.56
CCDC38-203ENST00000546803 CCDC113Q9H0I3 377 aa18.54■□□□□ 0.56
CCDC38-203ENST00000546803 HPSEQ9Y251 543 aa18.54■□□□□ 0.56
CCDC38-203ENST00000546803 YBX2Q9Y2T7 364 aaKnown RBP18.54■□□□□ 0.56
CCDC38-203ENST00000546803 ARID2Q68CP9 1835 aa18.53■□□□□ 0.56
CCDC38-203ENST00000546803 ADGRA3Q8IWK6 1321 aa18.53■□□□□ 0.56
CCDC38-203ENST00000546803 GOLGA6L4A6NEF3 574 aa18.53■□□□□ 0.56
CCDC38-203ENST00000546803 ACKR2O00590 384 aa18.53■□□□□ 0.56
CCDC38-203ENST00000546803 ZNF623O75123 536 aa18.53■□□□□ 0.56
CCDC38-203ENST00000546803 EOMESO95936 686 aa18.53■□□□□ 0.56
CCDC38-203ENST00000546803 PRKCBP05771 671 aa18.53■□□□□ 0.56
CCDC38-203ENST00000546803 PFKFB1P16118 471 aa18.53■□□□□ 0.56
CCDC38-203ENST00000546803 DYMQ7RTS9 669 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms