RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 AP4S1Q9Y587 144 aa13.63□□□□□ -0.23
PTCH1-212ENST00000546744 H0Y626 953 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 TRIM16O95361 564 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 KRT75O95678 551 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 CHEK2O96017 543 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 TRPC1P48995 793 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 MORF4L2Q15014 288 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 NAIF1Q69YI7 327 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 RAPH1Q70E73 1250 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PACS2Q86VP3 889 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 FBXO11Q86XK2 927 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 ADSSL1Q8N142 457 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 USP38Q8NB14 1042 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PIGOQ8TEQ8 1089 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 ERGIC2Q96RQ1 377 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 AIPL1Q9NZN9 384 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 C15orf41Q9Y2V0 281 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 TSC22D4Q9Y3Q8 395 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 WDR91A4D1P6 747 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PALM3A6NDB9 673 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 SYCE1LA8MT33 242 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 FXR1P51114 621 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 EXOSC10Q01780 885 aaKnown RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 ZCWPW2Q504Y3 356 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PBXIP1Q96AQ6 731 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 ZBTB10Q96DT7 871 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 TRABDQ9H4I3 376 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 UBE2TQ9NPD8 197 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 A1CFQ9NQ94 594 aaKnown RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 AMACRQ9UHK6 382 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 IQCA1LA6NCM1 817 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 TULP2O00295 520 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 LPXNO60711 386 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 GNAT1P11488 350 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 TAC1P20366 129 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 KCNH2Q12809 1159 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 KYNUQ16719 465 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 NUDCD3Q8IVD9 361 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PRPF31Q8WWY3 499 aaKnown RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 RIN2Q8WYP3 895 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 DACT3Q96B18 629 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 EEF2KMTQ96G04 330 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PNKPQ96T60 521 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PABPC3Q9H361 631 aaKnown RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 UVRAGQ9P2Y5 699 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 FBXO2Q9UK22 296 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PDE5AO76074 875 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 SEC24CP53992 1094 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PPP2R5DQ14738 602 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PFKFB3Q16875 520 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 BRIP1Q9BX63 1249 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 TRPV6Q9H1D0 765 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 CARD9Q9H257 536 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 SUN2Q9UH99 717 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 SAP30BPQ9UHR5 308 aaKnown RBP13.62□□□□□ -0.23
PTCH1-212ENST00000546744 DNAJC12Q9UKB3 198 aa13.62□□□□□ -0.23
PTCH1-212ENST00000546744 PALLDQ8WX93 1383 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 PRAMEF22A3QJZ6 481 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 CFLARO15519 480 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 IL10P22301 178 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 EPHB1P54762 984 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 IRGCQ6NXR0 463 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 DARS2Q6PI48 645 aaKnown RBP13.61□□□□□ -0.23
PTCH1-212ENST00000546744 DDHD1Q8NEL9 900 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 VPS39Q96JC1 886 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 ERP44Q9BS26 406 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 TMBIM4Q9HC24 238 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 KIAA1586Q9HCI6 787 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 DCTN4Q9UJW0 460 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 RPL26L1Q9UNX3 145 aaKnown RBP13.61□□□□□ -0.23
PTCH1-212ENST00000546744 PXDNLA1KZ92 1463 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 FKBP6O75344 327 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 RHOBTB3O94955 611 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 GYPCP04921 128 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 POLR2MP0CAP2 368 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 PIK3CAP42336 1068 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 USP11P51784 963 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 MAP3K10Q02779 954 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 DEPDC1BQ8WUY9 529 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 NSL1Q96IY1 281 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 SUCLA2Q9P2R7 463 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-212ENST00000546744 STX18Q9P2W9 335 aaKnown RBP13.61□□□□□ -0.23
PTCH1-212ENST00000546744 H3BQF6 201 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 HNRNPRO43390 633 aaKnown RBP13.61□□□□□ -0.23
PTCH1-212ENST00000546744 ORC4O43929 436 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 NUP107P57740 925 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 DEFA1P59665 94 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 DEFA3P59666 94 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 MRPS15P82914 257 aaKnown RBP13.61□□□□□ -0.23
PTCH1-212ENST00000546744 DSG1Q02413 1049 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 RHOT1Q8IXI2 618 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 POMGNT1Q8WZA1 660 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 JADE3Q92613 823 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 HPS3Q969F9 1004 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 RIOK1Q9BRS2 568 aaKnown RBP13.61□□□□□ -0.23
PTCH1-212ENST00000546744 FRMD8Q9BZ67 464 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-212ENST00000546744 PARVBQ9HBI1 364 aa13.61□□□□□ -0.23
PTCH1-212ENST00000546744 DDX56Q9NY93 547 aaKnown RBP13.61□□□□□ -0.23
PTCH1-212ENST00000546744 STRIP2Q9ULQ0 834 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms