RNA–Protein interactions for RNA: ENST00000546592.1

GPN3-204, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 638 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-204ENST00000546592 C9orf50Q5SZB4 431 aa21.32■■□□□ 1
GPN3-204ENST00000546592 CDCA2Q69YH5 1023 aaPredicted RBP21.32■■□□□ 1
GPN3-204ENST00000546592 MYCT1Q8N699 235 aa21.32■■□□□ 1
GPN3-204ENST00000546592 SPIRE2Q8WWL2 714 aa21.32■■□□□ 1
GPN3-204ENST00000546592 PRO3102Q9H379 93 aa21.32■■□□□ 1
GPN3-204ENST00000546592 KMT5AQ9NQR1 393 aa21.32■■□□□ 1
GPN3-204ENST00000546592 PHLPP2Q6ZVD8 1323 aa21.31■■□□□ 1
GPN3-204ENST00000546592 A0A1W2PPC1 479 aa21.31■■□□□ 1
GPN3-204ENST00000546592 H0YCG3 227 aa21.31■■□□□ 1
GPN3-204ENST00000546592 ACTN4O43707 911 aaKnown RBP21.31■■□□□ 1
GPN3-204ENST00000546592 CSDE1O75534 798 aaKnown RBP21.31■■□□□ 1
GPN3-204ENST00000546592 ZNF202O95125 648 aa21.31■■□□□ 1
GPN3-204ENST00000546592 ZSCAN20P17040 1043 aaPredicted RBP21.31■■□□□ 1
GPN3-204ENST00000546592 GAP43P17677 238 aa21.31■■□□□ 1
GPN3-204ENST00000546592 FGFR4P22455 802 aa21.31■■□□□ 1
GPN3-204ENST00000546592 ZNF131P52739 623 aa21.31■■□□□ 1
GPN3-204ENST00000546592 UBE2HP62256 183 aa21.31■■□□□ 1
GPN3-204ENST00000546592 LONRF3Q496Y0 759 aa21.31■■□□□ 1
GPN3-204ENST00000546592 CNNM3Q8NE01 707 aa21.31■■□□□ 1
GPN3-204ENST00000546592 STAMQ92783 540 aa21.31■■□□□ 1
GPN3-204ENST00000546592 MINDY3Q9H8M7 445 aa21.31■■□□□ 1
GPN3-204ENST00000546592 DENND3A2RUS2 1198 aa21.3■■□□□ 1
GPN3-204ENST00000546592 PRPF40AO75400 957 aaKnown RBP21.3■■□□□ 1
GPN3-204ENST00000546592 IDEP14735 1019 aa21.3■■□□□ 1
GPN3-204ENST00000546592 SCP2P22307 547 aa21.3■■□□□ 1
GPN3-204ENST00000546592 MBTD1Q05BQ5 628 aa21.3■■□□□ 1
GPN3-204ENST00000546592 FAM160A1Q05DH4 1040 aa21.3■■□□□ 1
GPN3-204ENST00000546592 MAPK6Q16659 721 aa21.3■■□□□ 1
GPN3-204ENST00000546592 TCTN1Q2MV58 587 aa21.3■■□□□ 1
GPN3-204ENST00000546592 KANK3Q6NY19 840 aa21.3■■□□□ 1
GPN3-204ENST00000546592 CCDC65Q8IXS2 484 aa21.3■■□□□ 1
GPN3-204ENST00000546592 DNAJC19Q96DA6 116 aa21.3■■□□□ 1
GPN3-204ENST00000546592 C7orf25Q9BPX7 421 aa21.3■■□□□ 1
GPN3-204ENST00000546592 NTPCRQ9BSD7 190 aaKnown RBP21.3■■□□□ 1
GPN3-204ENST00000546592 TRIM9Q9C026 710 aa21.3■■□□□ 1
GPN3-204ENST00000546592 CHST12Q9NRB3 414 aa21.3■■□□□ 1
GPN3-204ENST00000546592 PRMT7Q9NVM4 692 aaPredicted RBP21.3■■□□□ 1
GPN3-204ENST00000546592 SEL1LQ9UBV2 794 aa21.3■■□□□ 1
GPN3-204ENST00000546592 COLQQ9Y215 455 aaPredicted RBP21.3■■□□□ 1
GPN3-204ENST00000546592 SLC4A7Q9Y6M7 1214 aa21.3■■□□□ 1
GPN3-204ENST00000546592 TET1Q8NFU7 2136 aa21.29■■□□□ 1
GPN3-204ENST00000546592 GOLGA6L22H0YM25 854 aa21.29■■□□□ 1
GPN3-204ENST00000546592 K7ERI5 159 aa21.29■■□□□ 1
GPN3-204ENST00000546592 AMHP03971 560 aa21.29■■□□□ 1
GPN3-204ENST00000546592 AFMP43652 599 aa21.29■■□□□ 1
GPN3-204ENST00000546592 ASIC1P78348 528 aa21.29■■□□□ 1
GPN3-204ENST00000546592 CNNM4Q6P4Q7 775 aa21.29■■□□□ 1
GPN3-204ENST00000546592 KRBA2Q6ZNG9 492 aa21.29■■□□□ 1
GPN3-204ENST00000546592 FMR1NBQ8N0W7 255 aaPredicted RBP21.29■■□□□ 1
GPN3-204ENST00000546592 SLC17A8Q8NDX2 589 aa21.29■■□□□ 1
GPN3-204ENST00000546592 PAGE5Q96GU1 130 aa21.29■■□□□ 1
GPN3-204ENST00000546592 PRIMPOLQ96LW4 560 aa21.29■■□□□ 1
GPN3-204ENST00000546592 TMX1Q9H3N1 280 aa21.29■■□□□ 1
GPN3-204ENST00000546592 TMEM134Q9H6X4 195 aa21.29■■□□□ 1
GPN3-204ENST00000546592 PANK4Q9NVE7 773 aa21.29■■□□□ 1
GPN3-204ENST00000546592 RNF216Q9NWF9 866 aaPredicted RBP21.29■■□□□ 1
GPN3-204ENST00000546592 DACT1Q9NYF0 836 aa21.29■■□□□ 1
GPN3-204ENST00000546592 PIN4Q9Y237 131 aaKnown RBP21.29■■□□□ 1
GPN3-204ENST00000546592 SLC16A4O15374 487 aa21.28■■□□□ 1
GPN3-204ENST00000546592 TRAK2O60296 914 aa21.28■■□□□ 1
GPN3-204ENST00000546592 GADD45BO75293 160 aaPredicted RBP21.28■■□□□ 1
GPN3-204ENST00000546592 MYL1P05976 194 aa21.28■■□□□ 1
GPN3-204ENST00000546592 AXLP30530 894 aa21.28■■□□□ 1
GPN3-204ENST00000546592 ABCD1P33897 745 aa21.28■■□□□ 1
GPN3-204ENST00000546592 WDR5P61964 334 aaKnown RBP21.28■■□□□ 1
GPN3-204ENST00000546592 RASIP1Q5U651 963 aa21.28■■□□□ 1
GPN3-204ENST00000546592 PPP4R3CPQ6ZMV5 832 aa21.28■■□□□ 1
GPN3-204ENST00000546592 FAM178BQ8IXR5 827 aa21.28■■□□□ 1
GPN3-204ENST00000546592 SLC9A7Q96T83 725 aa21.28■■□□□ 1
GPN3-204ENST00000546592 ADAM2Q99965 735 aa21.28■■□□□ 1
GPN3-204ENST00000546592 KIFC3Q9BVG8 833 aa21.28■■□□□ 1
GPN3-204ENST00000546592 TSPYL2Q9H2G4 693 aaPredicted RBP21.28■■□□□ 1
GPN3-204ENST00000546592 FZD8Q9H461 694 aa21.28■■□□□ 1
GPN3-204ENST00000546592 C1orf112Q9NSG2 853 aa21.28■■□□□ 1
GPN3-204ENST00000546592 AGPAT5Q9NUQ2 364 aa21.28■■□□□ 1
GPN3-204ENST00000546592 ARHGAP28Q9P2N2 729 aa21.28■■□□□ 1
GPN3-204ENST00000546592 ADGRA3Q8IWK6 1321 aa21.28■■□□□ 1
GPN3-204ENST00000546592 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.27■■□□□ 1
GPN3-204ENST00000546592 ENPP3O14638 875 aa21.27■■□□□ 1
GPN3-204ENST00000546592 PRKCBP05771 671 aa21.27■■□□□ 1
GPN3-204ENST00000546592 LIG1P18858 919 aa21.27■■□□□ 1
GPN3-204ENST00000546592 STRN3Q13033 797 aa21.27■■□□□ 1
GPN3-204ENST00000546592 DSC3Q14574 896 aa21.27■■□□□ 1
GPN3-204ENST00000546592 FAM187BQ17R55 369 aa21.27■■□□□ 1
GPN3-204ENST00000546592 TMEM132AQ24JP5 1023 aa21.27■■□□□ 1
GPN3-204ENST00000546592 HERC4Q5GLZ8 1057 aaPredicted RBP21.27■■□□□ 1
GPN3-204ENST00000546592 PHOSPHO2Q8TCD6 241 aa21.27■■□□□ 1
GPN3-204ENST00000546592 RGS18Q9NS28 235 aa21.27■■□□□ 1
GPN3-204ENST00000546592 CXXC1Q9P0U4 656 aaPredicted RBP21.27■■□□□ 1
GPN3-204ENST00000546592 FRMD3A2A2Y4 597 aa21.26■□□□□ 0.99
GPN3-204ENST00000546592 ACKR2O00590 384 aa21.26■□□□□ 0.99
GPN3-204ENST00000546592 GTPBP6O43824 516 aaPredicted RBP21.26■□□□□ 0.99
GPN3-204ENST00000546592 TSPAN1O60635 241 aa21.26■□□□□ 0.99
GPN3-204ENST00000546592 MAPTP10636 758 aaKnown RBP21.26■□□□□ 0.99
GPN3-204ENST00000546592 NCKAP1LP55160 1127 aa21.26■□□□□ 0.99
GPN3-204ENST00000546592 PRPF4BQ13523 1007 aaKnown RBP21.26■□□□□ 0.99
GPN3-204ENST00000546592 TWF2Q6IBS0 349 aaKnown RBP21.26■□□□□ 0.99
GPN3-204ENST00000546592 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.26■□□□□ 0.99
GPN3-204ENST00000546592 SLC24A5Q71RS6 500 aa21.26■□□□□ 0.99
GPN3-204ENST00000546592 SFR1Q86XK3 245 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms