RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 COL4A3BPQ9Y5P4 624 aa20.9■□□□□ 0.94
CHERP-204ENST00000546538 P4HBP07237 508 aaKnown RBP20.89■□□□□ 0.94
CHERP-204ENST00000546538 HOXA11P31270 313 aaPredicted RBP20.89■□□□□ 0.94
CHERP-204ENST00000546538 TECP42680 631 aa20.89■□□□□ 0.94
CHERP-204ENST00000546538 DNM2P50570 870 aa20.89■□□□□ 0.94
CHERP-204ENST00000546538 ANAPC15P60006 121 aa20.89■□□□□ 0.94
CHERP-204ENST00000546538 EPHA7Q15375 998 aa20.89■□□□□ 0.94
CHERP-204ENST00000546538 TWF2Q6IBS0 349 aaKnown RBP20.89■□□□□ 0.94
CHERP-204ENST00000546538 MRPL43Q8N983 215 aaKnown RBP20.89■□□□□ 0.94
CHERP-204ENST00000546538 PRPF31Q8WWY3 499 aaKnown RBP20.89■□□□□ 0.94
CHERP-204ENST00000546538 AGPAT5Q9NUQ2 364 aa20.89■□□□□ 0.94
CHERP-204ENST00000546538 TBC1D13Q9NVG8 400 aa20.89■□□□□ 0.94
CHERP-204ENST00000546538 PUF60Q9UHX1 559 aaKnown RBP20.89■□□□□ 0.94
CHERP-204ENST00000546538 ZDBF2Q9HCK1 2354 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 TBX3O15119 743 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 ZNF623O75123 536 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 OFD1O75665 1012 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 UBXN11Q5T124 520 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 CATSPER4Q7RTX7 472 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 TMC7Q7Z402 723 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 C4orf19Q8IY42 314 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 AUTS2Q8WXX7 1259 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 EDAQ92838 391 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 DYDC2Q96IM9 177 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 RPGRIP1Q96KN7 1286 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 CEP170P1Q96L14 293 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 NRDE2Q9H7Z3 1164 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 XPNPEP1Q9NQW7 623 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 DNAJB4Q9UDY4 337 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 HCFC2Q9Y5Z7 792 aa20.88■□□□□ 0.93
CHERP-204ENST00000546538 CLASP2O75122 1294 aaKnown RBP20.87■□□□□ 0.93
CHERP-204ENST00000546538 ZC3H11AO75152 810 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHERP-204ENST00000546538 YWHABP31946 246 aaKnown RBP20.87■□□□□ 0.93
CHERP-204ENST00000546538 CYP4A11Q02928 519 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 KRT17Q04695 432 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 LAMTOR4Q0VGL1 99 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 CTTNQ14247 550 aaKnown RBP20.87■□□□□ 0.93
CHERP-204ENST00000546538 NCAPH2Q6IBW4 605 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 AGMOQ6ZNB7 445 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 NSUN7Q8NE18 718 aaKnown RBP20.87■□□□□ 0.93
CHERP-204ENST00000546538 GTF3C6Q969F1 213 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 MRPL9Q9BYD2 267 aaKnown RBP20.87■□□□□ 0.93
CHERP-204ENST00000546538 ZBP1Q9H171 429 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 JAK2O60674 1132 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 SLITRK3O94933 977 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 POLGP54098 1239 aaPredicted RBP20.87■□□□□ 0.93
CHERP-204ENST00000546538 EMC2Q15006 297 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 ZNF280BQ86YH2 543 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 SLC7A3Q8WY07 619 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 INPP5FQ9Y2H2 1132 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 PCDHB2Q9Y5E7 798 aa20.87■□□□□ 0.93
CHERP-204ENST00000546538 FSD2A1L4K1 749 aa20.86■□□□□ 0.93
CHERP-204ENST00000546538 GALTP07902 379 aa20.86■□□□□ 0.93
CHERP-204ENST00000546538 SRGAP2CP0DJJ0 459 aa20.86■□□□□ 0.93
CHERP-204ENST00000546538 ALDH7A1P49419 539 aaKnown RBP20.86■□□□□ 0.93
CHERP-204ENST00000546538 SMC1AQ14683 1233 aaKnown RBP20.86■□□□□ 0.93
CHERP-204ENST00000546538 NOMO2Q5JPE7 1267 aa20.86■□□□□ 0.93
CHERP-204ENST00000546538 KANK3Q6NY19 840 aa20.86■□□□□ 0.93
CHERP-204ENST00000546538 MRPL10Q7Z7H8 261 aaKnown RBP20.86■□□□□ 0.93
CHERP-204ENST00000546538 IGSF21Q96ID5 467 aa20.86■□□□□ 0.93
CHERP-204ENST00000546538 JPH2Q9BR39 696 aaPredicted RBP20.86■□□□□ 0.93
CHERP-204ENST00000546538 INO80BQ9C086 356 aaPredicted RBP20.86■□□□□ 0.93
CHERP-204ENST00000546538 DDHD2O94830 711 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 SEC24BO95487 1268 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 XBP1P17861 261 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 KRT2P35908 639 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 RFC5P40937 340 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 SLC11A1P49279 550 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 ZXDAP98168 799 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 GLB1LQ6UWU2 654 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 TRIM67Q6ZTA4 783 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 FERMT3Q86UX7 667 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 VPS52Q8N1B4 723 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 PSPC1Q8WXF1 523 aaKnown RBP20.85■□□□□ 0.93
CHERP-204ENST00000546538 FBXL18Q96ME1 805 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 HSD17B14Q9BPX1 270 aa20.85■□□□□ 0.93
CHERP-204ENST00000546538 USP34Q70CQ2 3546 aa20.84■□□□□ 0.93
CHERP-204ENST00000546538 BTBD18B2RXH4 712 aa20.84■□□□□ 0.93
CHERP-204ENST00000546538 SP100P23497 879 aaPredicted RBP20.84■□□□□ 0.93
CHERP-204ENST00000546538 RAB27AP51159 221 aa20.84■□□□□ 0.93
CHERP-204ENST00000546538 FOSBP53539 338 aa20.84■□□□□ 0.93
CHERP-204ENST00000546538 XKR9Q5GH70 373 aa20.84■□□□□ 0.93
CHERP-204ENST00000546538 SRGAP1Q7Z6B7 1085 aa20.84■□□□□ 0.93
CHERP-204ENST00000546538 RNF149Q8NC42 400 aa20.84■□□□□ 0.93
CHERP-204ENST00000546538 SMG8Q8ND04 991 aaKnown RBP20.84■□□□□ 0.93
CHERP-204ENST00000546538 TMEM169Q96HH4 297 aa20.84■□□□□ 0.93
CHERP-204ENST00000546538 EIF2AK1Q9BQI3 630 aaKnown RBP20.84■□□□□ 0.93
CHERP-204ENST00000546538 ZSWIM4Q9H7M6 989 aa20.84■□□□□ 0.93
CHERP-204ENST00000546538 PPME1Q9Y570 386 aa20.84■□□□□ 0.93
CHERP-204ENST00000546538 A0A087WWV3 80 aa20.83■□□□□ 0.93
CHERP-204ENST00000546538 DKC1O60832 514 aaKnown RBP eCLIP20.83■□□□□ 0.93
CHERP-204ENST00000546538 CXCL14O95715 111 aa20.83■□□□□ 0.93
CHERP-204ENST00000546538 WEE2P0C1S8 567 aa20.83■□□□□ 0.93
CHERP-204ENST00000546538 HOXB8P17481 243 aaPredicted RBP20.83■□□□□ 0.93
CHERP-204ENST00000546538 ANKRD1Q15327 319 aa20.83■□□□□ 0.93
CHERP-204ENST00000546538 DDX53Q86TM3 631 aaKnown RBP20.83■□□□□ 0.93
CHERP-204ENST00000546538 TPH2Q8IWU9 490 aa20.83■□□□□ 0.93
CHERP-204ENST00000546538 GBP3Q9H0R5 595 aa20.83■□□□□ 0.93
CHERP-204ENST00000546538 IRAK3Q9Y616 596 aa20.83■□□□□ 0.93
CHERP-204ENST00000546538 TMEM221A6NGB7 291 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms