RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 BASP1P80723 227 aaKnown RBP12.7□□□□□ -0.38
CHERP-203ENST00000546361 LAMC2Q13753 1193 aa12.7□□□□□ -0.38
CHERP-203ENST00000546361 TOGARAM2Q6ZUX3 1019 aa12.7□□□□□ -0.38
CHERP-203ENST00000546361 RNF14Q9UBS8 474 aa12.7□□□□□ -0.38
CHERP-203ENST00000546361 PGK2P07205 417 aa12.7□□□□□ -0.38
CHERP-203ENST00000546361 APOBEC3HQ6NTF7 200 aaKnown RBP12.7□□□□□ -0.38
CHERP-203ENST00000546361 GPC2Q8N158 579 aa12.7□□□□□ -0.38
CHERP-203ENST00000546361 GMCL1Q96IK5 515 aa12.7□□□□□ -0.38
CHERP-203ENST00000546361 ZWILCHQ9H900 591 aa12.7□□□□□ -0.38
CHERP-203ENST00000546361 A6NNZ2 444 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 GMNNO75496 209 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 HEXIM1O94992 359 aaKnown RBP12.69□□□□□ -0.38
CHERP-203ENST00000546361 RWDD2BP57060 319 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 PDE1BQ01064 536 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 PLCB4Q15147 1175 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 SEC23AQ15436 765 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 TUBB8Q3ZCM7 444 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 CYP4F22Q6NT55 531 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 KIF9Q9HAQ2 790 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 EPB41L5Q9HCM4 733 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 PDE4DIPQ5VU43 2346 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 SALL1Q9NSC2 1324 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 EIF3CLB5ME19 914 aaKnown RBP12.69□□□□□ -0.38
CHERP-203ENST00000546361 ZMYND10O75800 440 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 ECEL1O95672 775 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 EMC2Q15006 297 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 RWDD4Q6NW29 188 aaKnown RBP12.69□□□□□ -0.38
CHERP-203ENST00000546361 VSIG1Q86XK7 387 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 SKA2Q8WVK7 121 aaPredicted RBP12.69□□□□□ -0.38
CHERP-203ENST00000546361 EIF3CQ99613 913 aaKnown RBP12.69□□□□□ -0.38
CHERP-203ENST00000546361 ABHD10Q9NUJ1 306 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 ANAPC5Q9UJX4 755 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 AGAP1Q9UPQ3 857 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 PPP2R3BQ9Y5P8 575 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 UBE4BO95155 1302 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 POC1B-GALNT4F8VUJ3 575 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 ASAP2O43150 1006 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 SLC4A1P02730 911 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 GBP1P32455 592 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 GPC5P78333 572 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 DGKDQ16760 1214 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 TTC39CQ8N584 583 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 RABGGTAQ92696 567 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 PBKQ96KB5 322 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 RUNDC3BQ96NL0 473 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 C7orf25Q9BPX7 421 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 INTS2Q9H0H0 1204 aaKnown RBP12.69□□□□□ -0.38
CHERP-203ENST00000546361 MROH8Q9H579 483 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 RRAGCQ9HB90 399 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 DDX4Q9NQI0 724 aaKnown RBP12.69□□□□□ -0.38
CHERP-203ENST00000546361 MAGED2Q9UNF1 606 aaPredicted RBP12.69□□□□□ -0.38
CHERP-203ENST00000546361 MON2Q7Z3U7 1717 aa12.69□□□□□ -0.38
CHERP-203ENST00000546361 GNA15P30679 374 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 SHMT1P34896 483 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 FCGRTP55899 365 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 EFCAB12Q6NXP0 572 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 ARHGEF18Q6ZSZ5 1173 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 FRMD5Q7Z6J6 570 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 OPTNQ96CV9 577 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 GPRASP2Q96D09 838 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 ZNF560Q96MR9 790 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 VPS33BQ9H267 617 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.68□□□□□ -0.38
CHERP-203ENST00000546361 RPS6KA5O75582 802 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 CPB1P15086 417 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 ACTR2P61160 394 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 SDCCAG8Q86SQ7 713 aaPredicted RBP12.68□□□□□ -0.38
CHERP-203ENST00000546361 RPUSD2Q8IZ73 545 aaKnown RBP12.68□□□□□ -0.38
CHERP-203ENST00000546361 PPP4R1Q8TF05 950 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 CABS1Q96KC9 395 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 HSPBP1Q9NZL4 362 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 KCND2Q9NZV8 630 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 CPA4Q9UI42 421 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 SNX9Q9Y5X1 595 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 KIAA0391O15091 583 aaKnown RBP12.68□□□□□ -0.38
CHERP-203ENST00000546361 MSH4O15457 936 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 UPP2O95045 317 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 ZBED1O96006 694 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 SRGAP2BP0DMP2 458 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 PLS3P13797 630 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 SDC4P31431 198 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 AP3M2P53677 418 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 EPHB1P54762 984 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 ZC2HC1CQ53FD0 456 aaPredicted RBP12.68□□□□□ -0.38
CHERP-203ENST00000546361 ANKRD20A3Q5VUR7 823 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 FAM117BQ6P1L5 589 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 ENOSF1Q7L5Y1 443 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 PLEKHH3Q7Z736 793 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 ADSSL1Q8N142 457 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 BPIFA3Q9BQP9 254 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 IDI2Q9BXS1 227 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 MTIF3Q9H2K0 278 aaKnown RBP12.68□□□□□ -0.38
CHERP-203ENST00000546361 DONSONQ9NYP3 566 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 IPO11Q9UI26 975 aaKnown RBP12.68□□□□□ -0.38
CHERP-203ENST00000546361 AK9Q5TCS8 1911 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 DISP2A7MBM2 1401 aa12.68□□□□□ -0.38
CHERP-203ENST00000546361 TCRBV5S4A2TA0A5A2 114 aa12.67□□□□□ -0.38
CHERP-203ENST00000546361 M0QYV0 167 aa12.67□□□□□ -0.38
CHERP-203ENST00000546361 RHOBTB3O94955 611 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms