RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 OFD1O75665 1012 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 DEXIO95424 95 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 GALTP07902 379 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 SRGAP2BP0DMP2 458 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 CTSAP10619 480 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 HOXA11P31270 313 aaPredicted RBP14.11□□□□□ -0.15
COPS7A-221ENST00000546229 SLC11A1P49279 550 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 POLGP54098 1239 aaPredicted RBP14.11□□□□□ -0.15
COPS7A-221ENST00000546229 NLRP5P59047 1200 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 AKAP17AQ02040 695 aaKnown RBP14.11□□□□□ -0.15
COPS7A-221ENST00000546229 KRT17Q04695 432 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 ITIH3Q06033 890 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 PTPN14Q15678 1187 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 DDX53Q86TM3 631 aaKnown RBP14.11□□□□□ -0.15
COPS7A-221ENST00000546229 KREMEN2Q8NCW0 462 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 HAS1Q92839 578 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 ZNF274Q96GC6 653 aaPredicted RBP14.11□□□□□ -0.15
COPS7A-221ENST00000546229 C22orf23Q9BZE7 217 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 DHX33Q9H6R0 707 aaKnown RBP14.11□□□□□ -0.15
COPS7A-221ENST00000546229 PIN4Q9Y237 131 aaKnown RBP14.11□□□□□ -0.15
COPS7A-221ENST00000546229 WDR87Q6ZQQ6 2873 aa14.11□□□□□ -0.15
COPS7A-221ENST00000546229 ZC3H11AO75152 810 aaKnown RBP eCLIP14.1□□□□□ -0.15
COPS7A-221ENST00000546229 WEE2P0C1S8 567 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 SFPQP23246 707 aaKnown RBP eCLIP14.1□□□□□ -0.15
COPS7A-221ENST00000546229 PSMA5P28066 241 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 AVPR2P30518 371 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 NPEPPSP55786 919 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 INF2Q27J81 1249 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 TPRNQ4KMQ1 711 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 NOMO2Q5JPE7 1267 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 EARS2Q5JPH6 523 aaKnown RBP14.1□□□□□ -0.15
COPS7A-221ENST00000546229 MRPL10Q7Z7H8 261 aaKnown RBP14.1□□□□□ -0.15
COPS7A-221ENST00000546229 ZNF280BQ86YH2 543 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 RHPN2Q8IUC4 686 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 SUGP1Q8IWZ8 645 aaKnown RBP14.1□□□□□ -0.15
COPS7A-221ENST00000546229 RNF168Q8IYW5 571 aaPredicted RBP14.1□□□□□ -0.15
COPS7A-221ENST00000546229 VPS52Q8N1B4 723 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 C12orf76Q8N812 135 aaPredicted RBP14.1□□□□□ -0.15
COPS7A-221ENST00000546229 RIPOR3Q96MK2 946 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 NECTIN4Q96NY8 510 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 PHF20Q9BVI0 1012 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 TM6SF1Q9BZW5 370 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 CYP26B1Q9NR63 512 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 SUCLA2Q9P2R7 463 aaPredicted RBP14.1□□□□□ -0.15
COPS7A-221ENST00000546229 DDX25Q9UHL0 483 aaKnown RBP14.1□□□□□ -0.15
COPS7A-221ENST00000546229 SORCS3Q9UPU3 1222 aa14.1□□□□□ -0.15
COPS7A-221ENST00000546229 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.09□□□□□ -0.15
COPS7A-221ENST00000546229 INPPL1O15357 1258 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 DDHD2O94830 711 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 PAPLNO95428 1278 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 ALDH7A1P49419 539 aaKnown RBP14.09□□□□□ -0.15
COPS7A-221ENST00000546229 RAB27AP51159 221 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 PSMC5P62195 406 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 CDC42EP1Q00587 391 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 SSRP1Q08945 709 aaKnown RBP14.09□□□□□ -0.15
COPS7A-221ENST00000546229 NONOQ15233 471 aaKnown RBP eCLIP14.09□□□□□ -0.15
COPS7A-221ENST00000546229 LONRF3Q496Y0 759 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 TWF2Q6IBS0 349 aaKnown RBP14.09□□□□□ -0.15
COPS7A-221ENST00000546229 PPP4R3AQ6IN85 833 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 GALNT17Q6IS24 598 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 ZDHHC14Q8IZN3 488 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 TMEM169Q96HH4 297 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 NLRP4Q96MN2 994 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 SCLT1Q96NL6 688 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 PRRX2Q99811 253 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 LARP6Q9BRS8 491 aaKnown RBP14.09□□□□□ -0.15
COPS7A-221ENST00000546229 GJB4Q9NTQ9 266 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 FAM86C1Q9NVL1 165 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 DZANK1Q9NVP4 752 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 MARCH5Q9NX47 278 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 KCNJ14Q9UNX9 436 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 COL4A3BPQ9Y5P4 624 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 STK36Q9NRP7 1315 aa14.09□□□□□ -0.15
COPS7A-221ENST00000546229 FRYLO94915 3013 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 REC8O95072 547 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 CTDNEP1O95476 244 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 CXCL14O95715 111 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 ASGR2P07307 311 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 MTHFRP42898 656 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 SCRN1Q12765 414 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 RARS2Q5T160 578 aaKnown RBP14.08□□□□□ -0.16
COPS7A-221ENST00000546229 GLB1LQ6UWU2 654 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 KRT25Q7Z3Z0 450 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 TRIM22Q8IYM9 498 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 UBALD2Q8IYN6 164 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 TMEM105Q8N8V8 129 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 OXER1Q8TDS5 423 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 TNFRSF25Q93038 417 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 XPNPEP1Q9NQW7 623 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 USTQ9Y2C2 406 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 NR2E1Q9Y466 385 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 PCDHB2Q9Y5E7 798 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 DMXL1Q9Y485 3027 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 DOCK8Q8NF50 2099 aa14.08□□□□□ -0.16
COPS7A-221ENST00000546229 FAM205CA6NFA0 338 aa14.07□□□□□ -0.16
COPS7A-221ENST00000546229 DDX11L8A8MPP1 907 aa14.07□□□□□ -0.16
COPS7A-221ENST00000546229 DTNBO60941 627 aa14.07□□□□□ -0.16
COPS7A-221ENST00000546229 QARSP47897 775 aaKnown RBP14.07□□□□□ -0.16
COPS7A-221ENST00000546229 CLCN4P51793 760 aa14.07□□□□□ -0.16
COPS7A-221ENST00000546229 MTMR3Q13615 1198 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms