RNA–Protein interactions for RNA: ENST00000545694.1

SYNE1-239, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-239ENST00000545694 MRPS9P82933 396 aaKnown RBP6.82□□□□□ -1.32
SYNE1-239ENST00000545694 CDK17Q00537 523 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 TBC1D8BQ0IIM8 1120 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 BAATQ14032 418 aaPredicted RBP6.82□□□□□ -1.32
SYNE1-239ENST00000545694 TMEM132BQ14DG7 1078 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 PTPN14Q15678 1187 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 KNOP1Q1ED39 458 aaKnown RBP6.82□□□□□ -1.32
SYNE1-239ENST00000545694 ARSHQ5FYA8 562 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 TMEM214Q6NUQ4 689 aaKnown RBP6.82□□□□□ -1.32
SYNE1-239ENST00000545694 CYP26C1Q6V0L0 522 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 NSMFQ6X4W1 530 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 C1orf186Q6ZWK4 172 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 EPM2AIP1Q7L775 607 aaPredicted RBP6.82□□□□□ -1.32
SYNE1-239ENST00000545694 OTUD6AQ7L8S5 288 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 FRMD5Q7Z6J6 570 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 TPH2Q8IWU9 490 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 TXLNBQ8N3L3 684 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 TC2NQ8N9U0 490 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 GALNT6Q8NCL4 622 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 ZNF592Q92610 1267 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 ATP6V0A1Q93050 837 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 HVCN1Q96D96 273 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 TAAR1Q96RJ0 339 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 LXNQ9BS40 222 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 MKNK1Q9BUB5 465 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 NOC4LQ9BVI4 516 aaKnown RBP6.82□□□□□ -1.32
SYNE1-239ENST00000545694 VPS16Q9H269 839 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 BHMT2Q9H2M3 363 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 SEMA6BQ9H3T3 888 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 UNC45AQ9H3U1 944 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 ST6GALNAC4Q9H4F1 302 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 TYW1Q9NV66 732 aaKnown RBP6.82□□□□□ -1.32
SYNE1-239ENST00000545694 CYP39A1Q9NYL5 469 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 LARSQ9P2J5 1176 aaKnown RBP6.82□□□□□ -1.32
SYNE1-239ENST00000545694 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.82□□□□□ -1.32
SYNE1-239ENST00000545694 CAPN11Q9UMQ6 739 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 LUC7L2Q9Y383 392 aaKnown RBP6.82□□□□□ -1.32
SYNE1-239ENST00000545694 HRH3Q9Y5N1 445 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 LCTP09848 1927 aa6.82□□□□□ -1.32
SYNE1-239ENST00000545694 TRIM49BA6NDI0 452 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 H0YCG3 227 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 TRAF5O00463 557 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 TEX33O43247 280 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 PSAPP07602 524 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 TNNT1P13805 278 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 YBX3P16989 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
SYNE1-239ENST00000545694 EIF2AK2P19525 551 aaKnown RBP6.81□□□□□ -1.32
SYNE1-239ENST00000545694 MSX1P28360 303 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 RTP1P59025 263 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 ZBED6P86452 979 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 ENPEPQ07075 957 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 TUBB2AQ13885 445 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 STXBP2Q15833 593 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 VWA3BQ502W6 1294 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 C4orf17Q53FE4 359 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 MUM1L1Q5H9M0 696 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 GNASQ5JWF2 1037 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 ZNF662Q6ZS27 426 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 LRRC55Q6ZSA7 311 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 HS2ST1Q7LGA3 356 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 SLC9A9Q8IVB4 645 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 EXOC8Q8IYI6 725 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 CCDC170Q8IYT3 715 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 SHCBP1Q8NEM2 672 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 OR8K1Q8NGG5 319 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 KIF18AQ8NI77 898 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 SCFD1Q8WVM8 642 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 KCNN1Q92952 543 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 CDCA5Q96FF9 252 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 DYDC2Q96IM9 177 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 DRC1Q96MC2 740 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 CCDC43Q96MW1 224 aaKnown RBP6.81□□□□□ -1.32
SYNE1-239ENST00000545694 DNAJC7Q99615 494 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 REEP2Q9BRK0 252 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 TUBB2BQ9BVA1 445 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 MOV10L1Q9BXT6 1211 aaKnown RBP6.81□□□□□ -1.32
SYNE1-239ENST00000545694 KCTD10Q9H3F6 313 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 NDST4Q9H3R1 872 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 MROH8Q9H579 483 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 TMEM206Q9H813 350 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 MRPL44Q9H9J2 332 aaKnown RBP6.81□□□□□ -1.32
SYNE1-239ENST00000545694 RRAGCQ9HB90 399 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 A1CFQ9NQ94 594 aaKnown RBP6.81□□□□□ -1.32
SYNE1-239ENST00000545694 TAB2Q9NYJ8 693 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 COL20A1Q9P218 1284 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 MYO1AQ9UBC5 1043 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 AGTPBP1Q9UPW5 1226 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 MAPK8IP1Q9UQF2 711 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 PCDHA10Q9Y5I2 948 aa6.81□□□□□ -1.32
SYNE1-239ENST00000545694 ARID2Q68CP9 1835 aa6.8□□□□□ -1.32
SYNE1-239ENST00000545694 GTPBP10A4D1E9 387 aaKnown RBP6.8□□□□□ -1.32
SYNE1-239ENST00000545694 MAPK13O15264 365 aa6.8□□□□□ -1.32
SYNE1-239ENST00000545694 ADAM23O75077 832 aa6.8□□□□□ -1.32
SYNE1-239ENST00000545694 IPO7O95373 1038 aaKnown RBP6.8□□□□□ -1.32
SYNE1-239ENST00000545694 PROCP04070 461 aa6.8□□□□□ -1.32
SYNE1-239ENST00000545694 GYPCP04921 128 aa6.8□□□□□ -1.32
SYNE1-239ENST00000545694 CCDC175P0C221 793 aa6.8□□□□□ -1.32
SYNE1-239ENST00000545694 EPB41P11171 864 aaKnown RBP6.8□□□□□ -1.32
SYNE1-239ENST00000545694 MYCLP12524 364 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-239ENST00000545694 TRIM21P19474 475 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms