RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 RNF25Q96BH1 459 aaPredicted RBP9.45□□□□□ -0.9
TDP1-204ENST00000545686 ARHGEF26Q96DR7 871 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 RBM17Q96I25 401 aaKnown RBP9.45□□□□□ -0.9
TDP1-204ENST00000545686 RPS6KC1Q96S38 1066 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 SELENOSQ9BQE4 189 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 AMNQ9BXJ7 453 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 TAOK3Q9H2K8 898 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 LRRC4CQ9HCJ2 640 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 DDX4Q9NQI0 724 aaKnown RBP9.45□□□□□ -0.9
TDP1-204ENST00000545686 INTS9Q9NV88 658 aaKnown RBP9.45□□□□□ -0.9
TDP1-204ENST00000545686 DMAC2Q9NW81 257 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 SLX4Q8IY92 1834 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 BACH1O14867 736 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 BBOX1O75936 387 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 MTA2O94776 668 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 CYP3A4P08684 503 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 ABCB4P21439 1286 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 MYBPC2Q14324 1141 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 RINT1Q6NUQ1 792 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 CYFIP1Q7L576 1253 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 SLC9A9Q8IVB4 645 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 TBC1D16Q8TBP0 767 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 ALG3Q92685 438 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 EIF2AK1Q9BQI3 630 aaKnown RBP9.45□□□□□ -0.9
TDP1-204ENST00000545686 ZSWIM1Q9BR11 485 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 ROPN1BQ9BZX4 212 aaPredicted RBP9.45□□□□□ -0.9
TDP1-204ENST00000545686 THAP2Q9H0W7 228 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 AZI2Q9H6S1 392 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 ROPN1Q9HAT0 212 aaPredicted RBP9.45□□□□□ -0.9
TDP1-204ENST00000545686 KCND2Q9NZV8 630 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 NYAP2Q9P242 653 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 FRMD4BQ9Y2L6 1034 aa9.45□□□□□ -0.9
TDP1-204ENST00000545686 NRXN2Q9P2S2 1712 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 MSH4O15457 936 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 ATP6V1G2O95670 118 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 RARGP13631 454 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 KRT13P13646 458 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 ZNF131P52739 623 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 CTTNQ14247 550 aaKnown RBP9.44□□□□□ -0.9
TDP1-204ENST00000545686 SLC29A2Q14542 456 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 SEL1L2Q5TEA6 688 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 PRR5LQ6MZQ0 368 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 GLG1Q92896 1179 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 SCLT1Q96NL6 688 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 AGPAT1Q99943 283 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 PARVGQ9HBI0 331 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 VEZTQ9HBM0 779 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 CCNL1Q9UK58 526 aaPredicted RBP9.44□□□□□ -0.9
TDP1-204ENST00000545686 COG5Q9UP83 839 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 SNX24Q9Y343 169 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 PCDHA3Q9Y5H8 950 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 FAM86B1E9PN63 330 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 MPHOSPH10O00566 681 aaKnown RBP9.44□□□□□ -0.9
TDP1-204ENST00000545686 OAS1P00973 400 aaKnown RBP9.44□□□□□ -0.9
TDP1-204ENST00000545686 FAM86B2P0C5J1 330 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 BCRP11274 1271 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 RPL21P46778 160 aaKnown RBP9.44□□□□□ -0.9
TDP1-204ENST00000545686 PDE6CP51160 858 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 KCNA1Q09470 495 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 C1orf186Q6ZWK4 172 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 TRMT10CQ7L0Y3 403 aaKnown RBP9.44□□□□□ -0.9
TDP1-204ENST00000545686 TRPM8Q7Z2W7 1104 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 CEP57Q86XR8 500 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 LRRC34Q8IZ02 419 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 GBP7Q8N8V2 638 aaPredicted RBP9.44□□□□□ -0.9
TDP1-204ENST00000545686 PRELID2Q8N945 189 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 CCDC63Q8NA47 563 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 C12orf50Q8NA57 414 aaPredicted RBP9.44□□□□□ -0.9
TDP1-204ENST00000545686 N4BP2L2Q92802 583 aaPredicted RBP9.44□□□□□ -0.9
TDP1-204ENST00000545686 PLCD4Q9BRC7 762 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 WNT8AQ9H1J5 351 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 ALG6Q9Y672 507 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 SMCHD1A6NHR9 2005 aa9.44□□□□□ -0.9
TDP1-204ENST00000545686 PASKQ96RG2 1323 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 P4HA2O15460 535 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 RIPK2O43353 540 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 CBWD6Q4V339 395 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 CBWD3Q5JTY5 395 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 CBWD5Q5RIA9 395 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 SLFN13Q68D06 897 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 MYCT1Q8N699 235 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 TMEM174Q8WUU8 243 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 ART4Q93070 314 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 C18orf8Q96DM3 657 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 UIMC1Q96RL1 719 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 P2RX7Q99572 595 aaKnown RBP9.43□□□□□ -0.9
TDP1-204ENST00000545686 COA1Q9GZY4 146 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 NOD2Q9HC29 1040 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 AGPAT3Q9NRZ7 376 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 HOMER3Q9NSC5 361 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 POLLQ9UGP5 575 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 MTUS1Q9ULD2 1270 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 THSD7AQ9UPZ6 1657 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 SPATA31A6Q5VVP1 1343 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 A0A1B0GUA9 196 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 PIK3CDO00329 1044 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 RASGRF2O14827 1237 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 ATP5DP30049 168 aa9.43□□□□□ -0.9
TDP1-204ENST00000545686 HOXA10P31260 410 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms