RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 ATP11CQ8NB49 1132 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 RIN3Q8TB24 985 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 UBASH3BQ8TF42 649 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 HPS5Q9UPZ3 1129 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 AIM2O14862 343 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 TIMM10P62072 90 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 TMEM63BQ5T3F8 832 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 IZUMO2Q6UXV1 221 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 ZBED8Q8IZ13 594 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 BHMT2Q9H2M3 363 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-216ENST00000545170 PDS5BQ9NTI5 1447 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 TRIM13O60858 407 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 BAIAP3O94812 1187 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 IMPDH2P12268 514 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 PDIA2Q13087 525 aaKnown RBP9.15□□□□□ -0.95
ATXN3-216ENST00000545170 DNAJC24Q6P3W2 148 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 TNIP2Q8NFZ5 429 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 DHX38Q92620 1227 aaKnown RBP9.15□□□□□ -0.95
ATXN3-216ENST00000545170 DBNDD2Q9BQY9 259 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 MRPL1Q9BYD6 325 aaKnown RBP9.15□□□□□ -0.95
ATXN3-216ENST00000545170 ANO3Q9BYT9 981 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 MTO1Q9Y2Z2 717 aaKnown RBP9.15□□□□□ -0.95
ATXN3-216ENST00000545170 PTPN23Q9H3S7 1636 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 FAM187AA6NFU0 413 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.15□□□□□ -0.95
ATXN3-216ENST00000545170 RNF103O00237 685 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 BTN3A3O00478 584 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 NEMP1O14524 444 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 CDH2P19022 906 aaPredicted RBP9.15□□□□□ -0.95
ATXN3-216ENST00000545170 ZNF211Q13398 564 aaPredicted RBP9.15□□□□□ -0.95
ATXN3-216ENST00000545170 RBBP7Q16576 425 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 ZNF554Q86TJ5 538 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 C19orf18Q8NEA5 215 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 ADGRG1Q9Y653 693 aa9.15□□□□□ -0.95
ATXN3-216ENST00000545170 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.15□□□□□ -0.95
ATXN3-216ENST00000545170 PIK3R2O00459 728 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 SMNDC1O75940 238 aaKnown RBP eCLIP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 TOMM70O94826 608 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 LDHBP07195 334 aaKnown RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 KRT72Q14CN4 511 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 FRA10AC1Q70Z53 315 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ZNF654Q8IZM8 581 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 TCAIMQ8N3R3 496 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 C3orf20Q8ND61 904 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 SPATA4Q8NEY3 305 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 SUN5Q8TC36 379 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ARHGEF1Q92888 912 aaKnown RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ZKSCAN4Q969J2 545 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ALKBH8Q96BT7 664 aaKnown RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 MS4A14Q96JA4 679 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 HEMGNQ9BXL5 484 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 DDX25Q9UHL0 483 aaKnown RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 HAO1Q9UJM8 370 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 PRELID1Q9Y255 219 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 PPIP5K2O43314 1243 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 SRP72O76094 671 aaKnown RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 RCSD1Q6JBY9 416 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 CCNI2Q6ZMN8 369 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 DDIASQ8IXT1 998 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 KBTBD3Q8NAB2 608 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 BPIFA3Q9BQP9 254 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 STK39Q9UEW8 545 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 PNMA6EA0A0J9YXQ4 647 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 HNRNPRO43390 633 aaKnown RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ALBP02768 609 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 FBLN1P23142 703 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 PDIA3P30101 505 aaKnown RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ADD1P35611 737 aaKnown RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 NLRP11P59045 1033 aaKnown RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 SLC20A2Q08357 652 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 STK4Q13043 487 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 NSMFQ6X4W1 530 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 LINS1Q8NG48 757 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 PAGE5Q96GU1 130 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ACAP3Q96P50 834 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 FHDC1Q9C0D6 1143 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 PCDHA12Q9UN75 941 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 C15orf41Q9Y2V0 281 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ADGRA3Q8IWK6 1321 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 PSTPIP1O43586 416 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 BCL10O95999 233 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 CIITAP33076 1130 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 NUP62P37198 522 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 RECQLP46063 649 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 CTTNQ14247 550 aaKnown RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ADAMTS1Q9UHI8 967 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ABCC12Q96J65 1359 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ANGPT2O15123 496 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ASAP2O43150 1006 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 IDH3BO43837 385 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 TSC22D1Q15714 1073 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 PPP6R3Q5H9R7 873 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 ALKBH5Q6P6C2 394 aaKnown RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 LINC00301Q8NCQ3 95 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 DEPTORQ8TB45 409 aa9.14□□□□□ -0.95
ATXN3-216ENST00000545170 TEX13AQ9BXU3 409 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-216ENST00000545170 SNX2O60749 519 aa9.13□□□□□ -0.95
ATXN3-216ENST00000545170 KCNA2P16389 499 aa9.13□□□□□ -0.95
ATXN3-216ENST00000545170 GSTT1P30711 240 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms