RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 IFNA8P32881 189 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 CASP7P55210 303 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 KCNH2Q12809 1159 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 COASYQ13057 564 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 ZNF699Q32M78 642 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 ITPRIPL1Q6GPH6 555 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 SYDE1Q6ZW31 735 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-207ENST00000544891 FOXP3Q9BZS1 431 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 PPP1R9AQ9ULJ8 1098 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 CYP2D7A0A087X1C5 515 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 ECE2O60344 883 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 CLTAP09496 248 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 RFX5P48382 616 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-207ENST00000544891 FSCBQ5H9T9 825 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 TEDDM1Q5T9Z0 273 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 C12orf60Q5U649 245 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 EP400NLQ6ZTU2 488 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 OR6B3Q8NGW1 331 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 PGBD1Q96JS3 809 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 NYAP2Q9P242 653 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 IQCA1LA6NCM1 817 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 USP17L15C9J2P7 530 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 C19orf81C9J6K1 198 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 USP17L13C9JLJ4 530 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 USP17L11C9JVI0 530 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 USP17L18D6R9N7 530 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 USP17L22D6RA61 530 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 USP17L17D6RBQ6 530 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 USP17L19D6RCP7 530 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 USP17L20D6RJB6 530 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 ASAP2O43150 1006 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 PYGBP11216 843 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 SDC4P31431 198 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 SERPINB6P35237 376 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 SLC1A1P43005 524 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 VAMP7P51809 220 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 FOXO4P98177 505 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 USP17L24Q0WX57 530 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 TMED2Q15363 201 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 NBPF9Q3BBW0 867 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 FAM83BQ5T0W9 1011 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 CAPN12Q6ZSI9 719 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 PDCD7Q8N8D1 485 aaKnown RBP9.62□□□□□ -0.87
NECAP1-207ENST00000544891 CEP95Q96GE4 821 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 NLRP4Q96MN2 994 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 ZNF302Q9NR11 478 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 PCDHA10Q9Y5I2 948 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 ZHX2Q9Y6X8 837 aa9.62□□□□□ -0.87
NECAP1-207ENST00000544891 SMAPO00193 183 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 PMLP29590 882 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 DRP2Q13474 957 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 QRICH1Q2TAL8 776 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 MIGA2Q7L4E1 593 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 CRLF3Q8IUI8 442 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 EFHBQ8N7U6 833 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 ZBTB18Q99592 522 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 NGRNQ9NPE2 291 aaKnown RBP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 ANAPC7Q9UJX3 599 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 LRP5O75197 1615 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 UBE4BO95155 1302 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 SYNJ2BP-COX16A0A087WUM0 186 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 FGGP02679 453 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 SRGAP2CP0DJJ0 459 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 DDX5P17844 614 aaKnown RBP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 MX2P20592 715 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 RECQLP46063 649 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 GPC3P51654 580 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 CACNB1Q02641 598 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 DHX34Q14147 1143 aaKnown RBP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 STRIP1Q5VSL9 837 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 SPOPLQ6IQ16 392 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 RHOT1Q8IXI2 618 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 SCYL3Q8IZE3 742 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 UHMK1Q8TAS1 419 aaKnown RBP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 SKA2Q8WVK7 121 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 PPP1R2P1Q96PQ5 205 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 COX16Q9P0S2 106 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 GDAQ9Y2T3 454 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 COL5A3P25940 1745 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 CDC25AP30304 524 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 IFNAR2P48551 515 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 ZNF568Q3ZCX4 644 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 SNRNP48Q6IEG0 339 aaKnown RBP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 CDKL3Q8IVW4 592 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 AIFM3Q96NN9 605 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 SLIT2O94813 1529 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 SSU72P8A0A1W2PR75 194 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 OPHN1O60890 802 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 SAT1P21673 171 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 HOXA13P31271 388 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 CYP27A1Q02318 531 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 IFT88Q13099 833 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 HHIPL2Q6UWX4 724 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 ZBTB33Q86T24 672 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 SAMD3Q8N6K7 520 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 URGCPQ8TCY9 931 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 GRAMD1AQ96CP6 724 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 TRIM55Q9BYV6 548 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 FTOQ9C0B1 505 aaKnown RBP eCLIP9.61□□□□□ -0.87
NECAP1-207ENST00000544891 NDE1Q9NXR1 346 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms