RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 USP34Q70CQ2 3546 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 BICDL2A1A5D9 508 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 FAM86C2PA6NEL3 165 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 GOLGA6L3A6NEY3 463 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 BECN2A8MW95 431 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 GOLGA6L19H0YKK7 550 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 HAS3O00219 553 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 EIF3DO15371 548 aaKnown RBP eCLIP10.49□□□□□ -0.73
YBX3-215ENST00000544504 TLR3O15455 904 aaKnown RBP10.49□□□□□ -0.73
YBX3-215ENST00000544504 ASAP2O43150 1006 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 HIP1RO75146 1068 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 INSRRP14616 1297 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 PSEN2P49810 448 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 MRE11P49959 708 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 PURAQ00577 322 aaKnown RBP10.49□□□□□ -0.73
YBX3-215ENST00000544504 CDC42EP1Q00587 391 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 EHHADHQ08426 723 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 DMP1Q13316 513 aaPredicted RBP10.49□□□□□ -0.73
YBX3-215ENST00000544504 MXD4Q14582 209 aaPredicted RBP10.49□□□□□ -0.73
YBX3-215ENST00000544504 KIAA0753Q2KHM9 967 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 DPCR1Q3MIW9 517 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 ODR4Q5SWX8 454 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 FAM102BQ5T8I3 360 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 FOXR2Q6PJQ5 311 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 FAM178BQ8IXR5 827 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 MYOCDQ8IZQ8 938 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 SPIRE2Q8WWL2 714 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 LENG1Q96BZ8 264 aaPredicted RBP10.49□□□□□ -0.73
YBX3-215ENST00000544504 HVCN1Q96D96 273 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 DHTKD1Q96HY7 919 aaPredicted RBP10.49□□□□□ -0.73
YBX3-215ENST00000544504 PPP1R12CQ9BZL4 782 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 DNAJC25Q9H1X3 360 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 MRPL44Q9H9J2 332 aaKnown RBP10.49□□□□□ -0.73
YBX3-215ENST00000544504 PCDHA11Q9Y5I1 949 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 MTCH2Q9Y6C9 303 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 MUC6Q6W4X9 2439 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 ARID2Q68CP9 1835 aa10.49□□□□□ -0.73
YBX3-215ENST00000544504 NPHP3-ACAD11A0A0J9YXS1 232 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 A0A0U1RQG5 324 aaPredicted RBP10.48□□□□□ -0.73
YBX3-215ENST00000544504 PRR33A8MZF0 331 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 PI4K2BG5E9Z4 385 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 ARVCFO00192 962 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 IKBKBO14920 756 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 CYP2C18P33260 490 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 NAMPTP43490 491 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 BEX3Q00994 111 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 RAD51AP2Q09MP3 1159 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 PAK1Q13153 545 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 MAPK7Q13164 816 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 TFDP1Q14186 410 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 HSP90AA2PQ14568 343 aaPredicted RBP10.48□□□□□ -0.73
YBX3-215ENST00000544504 GRIK4Q16099 956 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 UVSSAQ2YD98 709 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 ISM2Q6H9L7 571 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 SFR1Q86XK3 245 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 FAM126BQ8IXS8 530 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 ADSSL1Q8N142 457 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 C7orf31Q8N865 590 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 PSPC1Q8WXF1 523 aaKnown RBP10.48□□□□□ -0.73
YBX3-215ENST00000544504 CEP89Q96ST8 783 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 MAP7D2Q96T17 732 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 TSG101Q99816 390 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 RNPEPQ9H4A4 650 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 ST6GALNAC4Q9H4F1 302 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 RWDD2AQ9UIY3 292 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 EXOC7Q9UPT5 735 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 SLC4A7Q9Y6M7 1214 aa10.48□□□□□ -0.73
YBX3-215ENST00000544504 IGKV6-21A0A0C4DH24 114 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 TMEM150BA6NC51 233 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 GCNT3O95395 438 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 FGFR1OPO95684 399 aaKnown RBP10.47□□□□□ -0.73
YBX3-215ENST00000544504 ASGR1P07306 291 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 SMIM10L2AP0DMW4 78 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 SMIM10L2BP0DMW5 78 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 BMP6P22004 513 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 KLRC1P26715 233 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 ARL2P36404 184 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 PRCPP42785 496 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 EFNA5P52803 228 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 RABGGTBP53611 331 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 SNRPFP62306 86 aaKnown RBP10.47□□□□□ -0.73
YBX3-215ENST00000544504 MYL5Q02045 173 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 LRRC63Q05C16 580 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 PTPN11Q06124 597 aaPredicted RBP10.47□□□□□ -0.73
YBX3-215ENST00000544504 STK4Q13043 487 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 TPD52L1Q16890 204 aaPredicted RBP10.47□□□□□ -0.73
YBX3-215ENST00000544504 L1TD1Q5T7N2 865 aaKnown RBP10.47□□□□□ -0.73
YBX3-215ENST00000544504 PPP4R3CPQ6ZMV5 832 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 OTOP2Q7RTS6 562 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 DAW1Q8N136 415 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 GOLGA5Q8TBA6 731 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 ENOX1Q8TC92 643 aaKnown RBP10.47□□□□□ -0.73
YBX3-215ENST00000544504 NOC3LQ8WTT2 800 aaKnown RBP10.47□□□□□ -0.73
YBX3-215ENST00000544504 KAT2BQ92831 832 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 KHSRPQ92945 711 aaKnown RBP eCLIP10.47□□□□□ -0.732e-7■■□□□ 13.3
YBX3-215ENST00000544504 KCNN1Q92952 543 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 HLA-CQ95604 372 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 VTI1AQ96AJ9 217 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 NTPCRQ9BSD7 190 aaKnown RBP10.47□□□□□ -0.73
YBX3-215ENST00000544504 POLR3FQ9H1D9 316 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms