RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 ATF5Q9Y2D1 282 aaPredicted RBP11.05□□□□□ -0.64
PCDH9-204ENST00000544246 SYNGAP1Q96PV0 1343 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 RAB14P61106 215 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 TBC1D9BQ66K14 1250 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 PARP9Q8IXQ6 854 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 TUBGCP3Q96CW5 907 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 ASIC4Q96FT7 647 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 EEF2KMTQ96G04 330 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 ZNF556Q9HAH1 456 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 CYP4F11Q9HBI6 524 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 PAPOLBQ9NRJ5 636 aaKnown RBP11.05□□□□□ -0.64
PCDH9-204ENST00000544246 ASAP2O43150 1006 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 CCDC22O60826 627 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 RUNX1T1Q06455 604 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 APOA5Q6Q788 366 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 NGRNQ9NPE2 291 aaKnown RBP11.05□□□□□ -0.64
PCDH9-204ENST00000544246 TSR3Q9UJK0 312 aaKnown RBP11.05□□□□□ -0.64
PCDH9-204ENST00000544246 PIK3C2GO75747 1445 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 CLCN6P51797 869 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 ABCE1P61221 599 aaKnown RBP11.05□□□□□ -0.64
PCDH9-204ENST00000544246 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 SMYD4Q8IYR2 804 aaPredicted RBP11.05□□□□□ -0.64
PCDH9-204ENST00000544246 GJD4Q96KN9 370 aaPredicted RBP11.05□□□□□ -0.64
PCDH9-204ENST00000544246 ZSWIM6Q9HCJ5 1215 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 NDUFA10O95299 355 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 A1BGP04217 495 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 PDCLQ13371 301 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 CYTH1Q15438 398 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 APPL2Q8NEU8 664 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 TGS1Q96RS0 853 aaKnown RBP11.04□□□□□ -0.64
PCDH9-204ENST00000544246 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.04□□□□□ -0.64
PCDH9-204ENST00000544246 DMAP1Q9NPF5 467 aaPredicted RBP11.04□□□□□ -0.64
PCDH9-204ENST00000544246 TBC1D23Q9NUY8 699 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 PNMA6EA0A0J9YXQ4 647 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 ITPRIPL1Q6GPH6 555 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 TRIM69Q86WT6 500 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 COG1Q8WTW3 980 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 PANX2Q96RD6 677 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 SP110Q9HB58 689 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 TSC22D4Q9Y3Q8 395 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 ABCC3O15438 1527 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 TTLL1O95922 423 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 LDHAP00338 332 aaKnown RBP11.04□□□□□ -0.64
PCDH9-204ENST00000544246 KIAA0825Q8IV33 1275 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 ZBED2Q9BTP6 218 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 RGL1Q9NZL6 768 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 TOMM70O94826 608 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 PMS2P54278 862 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 TSPY1Q01534 308 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 GUCY1A3Q02108 690 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 SLC10A5Q5PT55 438 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 TSSK1BQ9BXA7 367 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 NRBP1Q9UHY1 535 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 DCTN4Q9UJW0 460 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 PAIP2BQ9ULR5 123 aaKnown RBP11.04□□□□□ -0.64
PCDH9-204ENST00000544246 CLTCQ00610 1675 aaKnown RBP11.04□□□□□ -0.64
PCDH9-204ENST00000544246 TARSL2A2RTX5 802 aaKnown RBP11.04□□□□□ -0.64
PCDH9-204ENST00000544246 GYG1P46976 350 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 LVRNQ6Q4G3 990 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 PPP4R3CPQ6ZMV5 832 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 ARHGAP27Q6ZUM4 889 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 FLCNQ8NFG4 579 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 PLEKHA8Q96JA3 519 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 CCDC17Q96LX7 622 aa11.04□□□□□ -0.64
PCDH9-204ENST00000544246 FAM32AQ9Y421 112 aaKnown RBP11.04□□□□□ -0.64
PCDH9-204ENST00000544246 CFAP73A6NFT4 308 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 PDIA3P30101 505 aaKnown RBP11.03□□□□□ -0.64
PCDH9-204ENST00000544246 NUP62P37198 522 aaPredicted RBP11.03□□□□□ -0.64
PCDH9-204ENST00000544246 SLC39A14Q15043 492 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 KCTD1Q719H9 257 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 CHMP1BQ7LBR1 199 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 YIPF2Q9BWQ6 316 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 ZFYVE1Q9HBF4 777 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 UBA6A0AVT1 1052 aaPredicted RBP11.03□□□□□ -0.64
PCDH9-204ENST00000544246 ANGPT2O15123 496 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 ZNF667Q5HYK9 610 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 CAPRIN2Q6IMN6 1127 aaKnown RBP11.03□□□□□ -0.64
PCDH9-204ENST00000544246 SH3TC2Q8TF17 1288 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 GOLPH3LQ9H4A5 285 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 MAD2L2Q9UI95 211 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 COL17A1Q9UMD9 1497 aaPredicted RBP11.03□□□□□ -0.64
PCDH9-204ENST00000544246 TNFAIP2Q03169 654 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 NAALADL2Q58DX5 795 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 OLFML3Q9NRN5 406 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 SNX24Q9Y343 169 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 KIAA0232Q92628 1395 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 GOLGA8IPA6NC78 632 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 GOLGA8JA6NMD2 632 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 MEFVO15553 781 aaPredicted RBP11.03□□□□□ -0.64
PCDH9-204ENST00000544246 MYL3P08590 195 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 PTH1RQ03431 593 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 SCRN1Q12765 414 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 HIC1Q14526 733 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 FASTKD1Q53R41 847 aaKnown RBP11.03□□□□□ -0.64
PCDH9-204ENST00000544246 TOGARAM2Q6ZUX3 1019 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 HORMAD1Q86X24 394 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 TBCKQ8TEA7 893 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 HEY1Q9Y5J3 304 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 A0A0D9SFI3 127 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 MIF4GDA9UHW6 222 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms