RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 DGAT1O75907 488 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 CSPG5O95196 566 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 OR52Z1P0C646 297 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 IL9P15248 144 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 LAG3P18627 525 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TECP42680 631 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PLCB3Q01970 1234 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 POU5F1BQ06416 359 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 NBR1Q14596 966 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 CSPP1Q1MSJ5 1256 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TTC38Q5R3I4 469 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TWF2Q6IBS0 349 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PTCRAQ6ISU1 281 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 KCNT2Q6UVM3 1135 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 MRPL10Q7Z7H8 261 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 LRRC43Q8N309 656 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 FAM184AQ8NB25 1140 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 RNF149Q8NC42 400 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 RNF169Q8NCN4 708 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TCP11Q8WWU5 503 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TBC1D32Q96NH3 1257 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 MTRQ99707 1265 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 FAM105AQ9NUU6 356 aa14.61□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TBX10O75333 385 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 OFD1O75665 1012 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 GLRA2P23416 452 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PBX3P40426 434 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 MXD4Q14582 209 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ECM1Q16610 540 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 AMHR2Q16671 573 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PUS10Q3MIT2 529 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 SPOUT1Q5T280 376 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 FAM178BQ8IXR5 827 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 EFHBQ8N7U6 833 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 KHSRPQ92945 711 aaKnown RBP eCLIP14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 MSLNLQ96KJ4 702 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 IGFLR1Q9H665 355 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TUFT1Q9NNX1 390 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 CLEC1BQ9P126 229 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 LZTS1Q9Y250 596 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PCDHB2Q9Y5E7 798 aa14.6□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ST18O60284 1047 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 B4GALT3O60512 393 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 GLP2RO95838 553 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 SKIP12755 728 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 RPA1P27694 616 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 FXR2P51116 673 aaKnown RBP eCLIP14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 AFF1P51825 1210 aaKnown RBP14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 MBTD1Q05BQ5 628 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 CAPSQ13938 189 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 IL17AQ16552 155 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 LONRF3Q496Y0 759 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 AGMOQ6ZNB7 445 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 THNSL1Q8IYQ7 743 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 SLC39A11Q8N1S5 342 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 MRPS27Q92552 414 aaKnown RBP14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 NFKBIZQ9BYH8 718 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TLR9Q9NR96 1032 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 DBR1Q9UK59 544 aaKnown RBP14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PCDHB6Q9Y5E3 794 aa14.59□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TSPAN1O60635 241 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 NRIP1P48552 1158 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 RAB27AP51159 221 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 KCNC3Q14003 757 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PCBP1Q15365 356 aaKnown RBP eCLIP14.58□□□□□ -0.082e-7■■■□□ 16.3
TNFRSF1A-215ENST00000543359 POTEGQ6S5H5 508 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 TMEM173Q86WV6 379 aaPredicted RBP14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ABI1Q8IZP0 508 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 IGSF22Q8N9C0 903 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 SMG8Q8ND04 991 aaKnown RBP14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 VN1R2Q8NFZ6 395 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 RSPH1Q8WYR4 309 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ZNF558Q96NG5 402 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 NACC1Q96RE7 527 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 MRPL9Q9BYD2 267 aaKnown RBP14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 GPRC5CQ9NQ84 441 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 TBC1D13Q9NVG8 400 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 SPG21Q9NZD8 308 aa14.58□□□□□ -0.08
TNFRSF1A-215ENST00000543359 HIDE1A8MVS5 230 aa14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PER2O15055 1255 aa14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 EYA4O95677 639 aa14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 BCAR1P56945 870 aa14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 RBM10P98175 930 aaKnown RBP14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PTGDRQ13258 359 aa14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PDIA5Q14554 519 aa14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 SMAD2Q15796 467 aaKnown RBP14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 DUSP6Q16828 381 aa14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 NOMO2Q5JPE7 1267 aa14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PDE12Q6L8Q7 609 aaKnown RBP14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 RBM23Q86U06 439 aaKnown RBP14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 POLR3FQ9H1D9 316 aaPredicted RBP14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 NRDE2Q9H7Z3 1164 aa14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 TLE6Q9H808 572 aa14.57□□□□□ -0.08
TNFRSF1A-215ENST00000543359 C19orf67A6NJJ6 358 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 NT5C1B-RDH14C9J2C7 533 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 INPPL1O15357 1258 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 MBTPS2O43462 519 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 USO1O60763 962 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 GALTP07902 379 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms