RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 ALG3Q92685 438 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 SGSM3Q96HU1 749 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 DNAJC17Q9NVM6 304 aaKnown RBP15.38■□□□□ 0.05
PRAME-214ENST00000543184 GGA3Q9NZ52 723 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 RGL1Q9NZL6 768 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 ZNF70Q9UC06 446 aaPredicted RBP15.38■□□□□ 0.05
PRAME-214ENST00000543184 AMFRQ9UKV5 643 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 PTPN22Q9Y2R2 807 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 VIMP08670 466 aaKnown RBP15.38■□□□□ 0.05
PRAME-214ENST00000543184 TRIM49P0CI25 452 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 TRIM49CP0CI26 452 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 CREB1P16220 341 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 PPP4CP60510 307 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 NEDD9Q14511 834 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 KNOP1Q1ED39 458 aaKnown RBP15.38■□□□□ 0.05
PRAME-214ENST00000543184 CCDC25Q86WR0 208 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 CUL5Q93034 780 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 ELMO3Q96BJ8 720 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 CHMP6Q96FZ7 201 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 THAP2Q9H0W7 228 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 HACL1Q9UJ83 578 aa15.38■□□□□ 0.05
PRAME-214ENST00000543184 NAV1Q8NEY1 1877 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 ESYT2A0FGR8 921 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 GNA14O95837 355 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 NMT1P30419 496 aaKnown RBP15.37■□□□□ 0.05
PRAME-214ENST00000543184 DR1Q01658 176 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 ZNF746Q6NUN9 644 aaPredicted RBP15.37■□□□□ 0.05
PRAME-214ENST00000543184 DPY19L2Q6NUT2 758 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 POP1Q99575 1024 aaKnown RBP15.37■□□□□ 0.05
PRAME-214ENST00000543184 RUSC1Q9BVN2 902 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 LRRC27Q9C0I9 530 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 BHMT2Q9H2M3 363 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 COG5Q9UP83 839 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 NR3C1P04150 777 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 PLCG2P16885 1265 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 POU5F1Q01860 360 aaKnown RBP15.37■□□□□ 0.05
PRAME-214ENST00000543184 USH1GQ495M9 461 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 KRT35Q92764 455 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 SLC35C1Q96A29 364 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 ADAM7Q9H2U9 754 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 ZNF287Q9HBT7 754 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 ABCF3Q9NUQ8 709 aa15.37■□□□□ 0.05
PRAME-214ENST00000543184 PNMA6FA0A0J9YX94 578 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 TCRBV7S2A1N4TA0A589 114 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 ANKRD63C9JTQ0 380 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 DDX3YO15523 660 aaKnown RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 KCNJ1P48048 391 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 MARSP56192 900 aaKnown RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 ELF3P78545 371 aaPredicted RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 ERMARDQ5T6L9 678 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 AGBL2Q5U5Z8 902 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 TAX1BP1Q86VP1 789 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 ZDHHC14Q8IZN3 488 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 STAMBPL1Q96FJ0 436 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 THOC1Q96FV9 657 aaKnown RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 FAM163AQ96GL9 167 aaPredicted RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 HES6Q96HZ4 224 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 CSRNP1Q96S65 589 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 ACP6Q9NPH0 428 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.36■□□□□ 0.05
PRAME-214ENST00000543184 AGAP1Q9UPQ3 857 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 ARFGEF1Q9Y6D6 1849 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 ATMINO43313 823 aaPredicted RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 GDF11O95390 407 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 CLK2P49760 499 aaKnown RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 RASA3Q14644 834 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 ACTR5Q9H9F9 607 aaPredicted RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 NMRK2Q9NPI5 230 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 SUGT1Q9Y2Z0 365 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 DAAM1Q9Y4D1 1078 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 BRCA2P51587 3418 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 ASTN1O14525 1302 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 A8MUI8 341 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 PAX7P23759 505 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 PMS2P54278 862 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 ZNF543Q08ER8 600 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 DRAP1Q14919 205 aaPredicted RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 TRMT1LQ7Z2T5 733 aaKnown RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 SLFN11Q7Z7L1 901 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 RASGEF1CQ8N431 466 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 KIF2BQ8N4N8 673 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 C1orf131Q8NDD1 294 aaKnown RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 OLIG1Q8TAK6 271 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 PRCCQ92733 491 aaPredicted RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 BTBD6Q96KE9 485 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 NT5C3AQ9H0P0 336 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 VPS33BQ9H267 617 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 SUCLA2Q9P2R7 463 aaPredicted RBP15.36■□□□□ 0.05
PRAME-214ENST00000543184 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
PRAME-214ENST00000543184 MYO3BQ8WXR4 1341 aa15.35■□□□□ 0.05
PRAME-214ENST00000543184 C5orf60A6NFR6 353 aa15.35■□□□□ 0.05
PRAME-214ENST00000543184 CCT8L1PA6NM43 557 aa15.35■□□□□ 0.05
PRAME-214ENST00000543184 BHMG1C9JSJ3 638 aaPredicted RBP15.35■□□□□ 0.05
PRAME-214ENST00000543184 CCDC188H7C350 402 aa15.35■□□□□ 0.05
PRAME-214ENST00000543184 CHMP2AO43633 222 aa15.35■□□□□ 0.05
PRAME-214ENST00000543184 HOXA13P31271 388 aaPredicted RBP15.35■□□□□ 0.05
PRAME-214ENST00000543184 CYP2J2P51589 502 aa15.35■□□□□ 0.05
PRAME-214ENST00000543184 MTMR3Q13615 1198 aa15.35■□□□□ 0.05
PRAME-214ENST00000543184 IFI16Q16666 785 aaKnown RBP15.35■□□□□ 0.05
PRAME-214ENST00000543184 CBWD6Q4V339 395 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms