RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 BRPF3Q9ULD4 1205 aa10.07□□□□□ -0.8
UBC-211ENST00000542416 PIN4Q9Y237 131 aaKnown RBP10.07□□□□□ -0.8
UBC-211ENST00000542416 KLF18A0A0U1RQI7 1052 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 STK25O00506 426 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 ZNF862O60290 1169 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 OFD1O75665 1012 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 C1RP00736 705 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 NPR3P17342 541 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 CLCN4P51793 760 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 TARBP2Q15633 366 aaKnown RBP10.06□□□□□ -0.8
UBC-211ENST00000542416 TSGA10IPQ3SY00 556 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 CATSPER4Q7RTX7 472 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 AUTS2Q8WXX7 1259 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 BORCS6Q96GS4 357 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 ZNF668Q96K58 619 aaPredicted RBP10.06□□□□□ -0.8
UBC-211ENST00000542416 KLHL5Q96PQ7 755 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 TMEM175Q9BSA9 504 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 TEKT3Q9BXF9 490 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 NRDE2Q9H7Z3 1164 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 UBN1Q9NPG3 1134 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 INPP5FQ9Y2H2 1132 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 EP300Q09472 2414 aaPredicted RBP10.06□□□□□ -0.8
UBC-211ENST00000542416 KMT2EQ8IZD2 1858 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 CNTNAP2Q9UHC6 1331 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 MYO15AQ9UKN7 3530 aa10.06□□□□□ -0.8
UBC-211ENST00000542416 PLXNA4Q9HCM2 1894 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 A0A087WZ62 844 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 IGKV6-21A0A0C4DH24 114 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 MSH4O15457 936 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 PRPF3O43395 683 aaKnown RBP10.05□□□□□ -0.8
UBC-211ENST00000542416 PI15O43692 258 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 DKC1O60832 514 aaKnown RBP eCLIP10.05□□□□□ -0.8
UBC-211ENST00000542416 NR1I2O75469 434 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 URODP06132 367 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 ADH1AP07327 375 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 CNPP09543 421 aaKnown RBP10.05□□□□□ -0.8
UBC-211ENST00000542416 FGFR4P22455 802 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 CDC27P30260 824 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 SLC11A1P49279 550 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 LRCH2Q5VUJ6 765 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 MIER3Q7Z3K6 550 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 TMEM173Q86WV6 379 aaPredicted RBP10.05□□□□□ -0.8
UBC-211ENST00000542416 CNNM3Q8NE01 707 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 HDAC7Q8WUI4 952 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 SLC5A5Q92911 643 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 LENG9Q96B70 501 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 CCDC136Q96JN2 1154 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 FDXACB1Q9BRP7 624 aaPredicted RBP10.05□□□□□ -0.8
UBC-211ENST00000542416 GBP3Q9H0R5 595 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 WDR6Q9NNW5 1121 aaKnown RBP10.05□□□□□ -0.8
UBC-211ENST00000542416 FAM217BQ9NTX9 383 aaPredicted RBP10.05□□□□□ -0.8
UBC-211ENST00000542416 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.05□□□□□ -0.8
UBC-211ENST00000542416 SUCLA2Q9P2R7 463 aaPredicted RBP10.05□□□□□ -0.8
UBC-211ENST00000542416 SEPT9Q9UHD8 586 aaPredicted RBP10.05□□□□□ -0.8
UBC-211ENST00000542416 NAP1L2Q9ULW6 460 aaPredicted RBP10.05□□□□□ -0.8
UBC-211ENST00000542416 FAN1Q9Y2M0 1017 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 PPME1Q9Y570 386 aa10.05□□□□□ -0.8
UBC-211ENST00000542416 FNDC1Q4ZHG4 1894 aaPredicted RBP10.04□□□□□ -0.8
UBC-211ENST00000542416 CHMP2AO43633 222 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 LILRB3O75022 631 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 MAFO75444 373 aaPredicted RBP10.04□□□□□ -0.8
UBC-211ENST00000542416 CSDE1O75534 798 aaKnown RBP10.04□□□□□ -0.8
UBC-211ENST00000542416 GLUD1P00367 558 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 SOD2P04179 222 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 SRFP11831 508 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 GBP2P32456 591 aaPredicted RBP10.04□□□□□ -0.8
UBC-211ENST00000542416 ADD1P35611 737 aaKnown RBP10.04□□□□□ -0.8
UBC-211ENST00000542416 COL9A3Q14050 684 aaPredicted RBP10.04□□□□□ -0.8
UBC-211ENST00000542416 PCBP1Q15365 356 aaKnown RBP eCLIP10.04□□□□□ -0.8
UBC-211ENST00000542416 MTERF2Q49AM1 385 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 PHLDB3Q6NSJ2 640 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 KANK3Q6NY19 840 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 SRGAP1Q7Z6B7 1085 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 RHPN2Q8IUC4 686 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 LPPQ93052 612 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 RSAD1Q9HA92 442 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 EPS15L1Q9UBC2 864 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 PCDHB2Q9Y5E7 798 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 KIAA1671Q9BY89 1806 aa10.04□□□□□ -0.8
UBC-211ENST00000542416 CACNA1AO00555 2505 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 CCDC195A0A1B0GUA6 201 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 DDX11L8A8MPP1 907 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 PSMD10O75832 226 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 AK2P54819 239 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 NCBP1Q09161 790 aaKnown RBP10.03□□□□□ -0.8
UBC-211ENST00000542416 PUM1Q14671 1186 aaKnown RBP eCLIP10.03□□□□□ -0.8
UBC-211ENST00000542416 UGCGQ16739 394 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 Q4G0T1 1027 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 DGLUCYQ7Z3D6 616 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 MRPL10Q7Z7H8 261 aaKnown RBP10.03□□□□□ -0.8
UBC-211ENST00000542416 GPR65Q8IYL9 337 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 SLC44A3Q8N4M1 653 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 BCL7CQ8WUZ0 217 aaPredicted RBP10.03□□□□□ -0.8
UBC-211ENST00000542416 SLC7A3Q8WY07 619 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 SHDQ96IW2 340 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 RPS6KC1Q96S38 1066 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 RNF26Q9BY78 433 aaPredicted RBP10.03□□□□□ -0.8
UBC-211ENST00000542416 UNC45AQ9H3U1 944 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 PLEKHA4Q9H4M7 779 aa10.03□□□□□ -0.8
UBC-211ENST00000542416 MAN1C1Q9NR34 630 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms