RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 LINC01565O15544 149 aa22.56■■□□□ 1.2
DDB1-220ENST00000542337 LYPLA2O95372 231 aa22.56■■□□□ 1.2
DDB1-220ENST00000542337 SRGAP2BP0DMP2 458 aa22.56■■□□□ 1.2
DDB1-220ENST00000542337 MCM7P33993 719 aa22.56■■□□□ 1.2
DDB1-220ENST00000542337 ALDH7A1P49419 539 aaKnown RBP22.56■■□□□ 1.2
DDB1-220ENST00000542337 DLX2Q07687 328 aaPredicted RBP22.56■■□□□ 1.2
DDB1-220ENST00000542337 SMAD4Q13485 552 aaKnown RBP22.56■■□□□ 1.2
DDB1-220ENST00000542337 TFDP1Q14186 410 aa22.56■■□□□ 1.2
DDB1-220ENST00000542337 MTMR9Q96QG7 549 aa22.56■■□□□ 1.2
DDB1-220ENST00000542337 POP1Q99575 1024 aaKnown RBP22.56■■□□□ 1.2
DDB1-220ENST00000542337 FOXP1Q9H334 677 aaPredicted RBP22.56■■□□□ 1.2
DDB1-220ENST00000542337 NGRNQ9NPE2 291 aaKnown RBP22.56■■□□□ 1.2
DDB1-220ENST00000542337 MBTPS2O43462 519 aa22.55■■□□□ 1.2
DDB1-220ENST00000542337 ZNF623O75123 536 aa22.55■■□□□ 1.2
DDB1-220ENST00000542337 DGAT1O75907 488 aa22.55■■□□□ 1.2
DDB1-220ENST00000542337 RBM25P49756 843 aaKnown RBP22.55■■□□□ 1.2
DDB1-220ENST00000542337 ERVFC1P60507 584 aa22.55■■□□□ 1.2
DDB1-220ENST00000542337 ST3GAL1Q11201 340 aa22.55■■□□□ 1.2
DDB1-220ENST00000542337 FERMT3Q86UX7 667 aa22.55■■□□□ 1.2
DDB1-220ENST00000542337 RNF149Q8NC42 400 aa22.55■■□□□ 1.2
DDB1-220ENST00000542337 TCF25Q9BQ70 676 aa22.55■■□□□ 1.2
DDB1-220ENST00000542337 EPHX3Q9H6B9 360 aa22.55■■□□□ 1.2
DDB1-220ENST00000542337 AGPAT5Q9NUQ2 364 aa22.55■■□□□ 1.2
DDB1-220ENST00000542337 PER2O15055 1255 aa22.54■■□□□ 1.2
DDB1-220ENST00000542337 ZBTB39O15060 712 aa22.54■■□□□ 1.2
DDB1-220ENST00000542337 TBX10O75333 385 aa22.54■■□□□ 1.2
DDB1-220ENST00000542337 ERLIN2O94905 339 aa22.54■■□□□ 1.2
DDB1-220ENST00000542337 XRCC6P12956 609 aaKnown RBP eCLIP22.54■■□□□ 1.2
DDB1-220ENST00000542337 ATF7P17544 494 aaPredicted RBP22.54■■□□□ 1.2
DDB1-220ENST00000542337 COL9A1P20849 921 aa22.54■■□□□ 1.2
DDB1-220ENST00000542337 RNASELQ05823 741 aaKnown RBP22.54■■□□□ 1.2
DDB1-220ENST00000542337 ORC2Q13416 577 aaPredicted RBP22.54■■□□□ 1.2
DDB1-220ENST00000542337 PCBP1Q15365 356 aaKnown RBP eCLIP22.54■■□□□ 1.2
DDB1-220ENST00000542337 SMAD2Q15796 467 aaKnown RBP22.54■■□□□ 1.2
DDB1-220ENST00000542337 PLPP4Q5VZY2 271 aa22.54■■□□□ 1.2
DDB1-220ENST00000542337 TMC7Q7Z402 723 aa22.54■■□□□ 1.2
DDB1-220ENST00000542337 ADHFE1Q8IWW8 467 aa22.54■■□□□ 1.2
DDB1-220ENST00000542337 CD320Q9NPF0 282 aa22.54■■□□□ 1.2
DDB1-220ENST00000542337 PCDHB2Q9Y5E7 798 aa22.54■■□□□ 1.2
DDB1-220ENST00000542337 PCDHGC5Q9Y5F6 944 aa22.54■■□□□ 1.2
DDB1-220ENST00000542337 FSCN2O14926 492 aa22.53■■□□□ 1.2
DDB1-220ENST00000542337 ALADP13716 330 aa22.53■■□□□ 1.2
DDB1-220ENST00000542337 DUSP6Q16828 381 aa22.53■■□□□ 1.2
DDB1-220ENST00000542337 LONRF3Q496Y0 759 aa22.53■■□□□ 1.2
DDB1-220ENST00000542337 NOMO2Q5JPE7 1267 aa22.53■■□□□ 1.2
DDB1-220ENST00000542337 FBXO18Q8NFZ0 1043 aa22.53■■□□□ 1.2
DDB1-220ENST00000542337 ERMNQ8TAM6 284 aa22.53■■□□□ 1.2
DDB1-220ENST00000542337 URGCPQ8TCY9 931 aa22.53■■□□□ 1.2
DDB1-220ENST00000542337 LPPQ93052 612 aa22.53■■□□□ 1.2
DDB1-220ENST00000542337 NOL7Q9UMY1 257 aaKnown RBP22.53■■□□□ 1.2
DDB1-220ENST00000542337 INPP5FQ9Y2H2 1132 aa22.53■■□□□ 1.2
DDB1-220ENST00000542337 FNDC1Q4ZHG4 1894 aaPredicted RBP22.53■■□□□ 1.2
DDB1-220ENST00000542337 PI4K2BG5E9Z4 385 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 PBX3P40426 434 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 BCAR1P56945 870 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 ZP2Q05996 745 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 COASYQ13057 564 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 C8orf34Q49A92 452 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 TMEM31Q5JXX7 168 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 SLC39A11Q8N1S5 342 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 TMEM87AQ8NBN3 555 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 TMEM169Q96HH4 297 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 MSLNLQ96KJ4 702 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 TMEM60Q9H2L4 133 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 TUFT1Q9NNX1 390 aa22.52■■□□□ 1.2
DDB1-220ENST00000542337 WNT7AO00755 349 aa22.51■■□□□ 1.19
DDB1-220ENST00000542337 ZC3H11AO75152 810 aaKnown RBP eCLIP22.51■■□□□ 1.19
DDB1-220ENST00000542337 EYA4O95677 639 aa22.51■■□□□ 1.19
DDB1-220ENST00000542337 AXLP30530 894 aa22.51■■□□□ 1.19
DDB1-220ENST00000542337 PTENP60484 403 aa22.51■■□□□ 1.19
DDB1-220ENST00000542337 SMC1AQ14683 1233 aaKnown RBP22.51■■□□□ 1.19
DDB1-220ENST00000542337 ZNF174Q15697 407 aa22.51■■□□□ 1.19
DDB1-220ENST00000542337 CNNM3Q8NE01 707 aa22.51■■□□□ 1.19
DDB1-220ENST00000542337 MINDY3Q9H8M7 445 aa22.51■■□□□ 1.19
DDB1-220ENST00000542337 UPF2Q9HAU5 1272 aaKnown RBP22.51■■□□□ 1.19
DDB1-220ENST00000542337 CLEC1BQ9P126 229 aa22.51■■□□□ 1.19
DDB1-220ENST00000542337 KANSL3Q9P2N6 904 aa22.51■■□□□ 1.19
DDB1-220ENST00000542337 BARX2Q9UMQ3 279 aaPredicted RBP22.51■■□□□ 1.19
DDB1-220ENST00000542337 KIF3AQ9Y496 699 aa22.51■■□□□ 1.19
DDB1-220ENST00000542337 KIAA1671Q9BY89 1806 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 POTEMA6NI47 508 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 INO80B-WBP1J3KQ70 363 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 OFD1O75665 1012 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 OR52Z1P0C646 297 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 TECP42680 631 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 TRAPPC10P48553 1259 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 RARRES1P49788 294 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 POU5F1BQ06416 359 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 PIGOQ8TEQ8 1089 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 CCDC51Q96ER9 411 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 FAM193BQ96PV7 902 aaPredicted RBP22.5■■□□□ 1.19
DDB1-220ENST00000542337 NACC1Q96RE7 527 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 UBN1Q9NPG3 1134 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 XPNPEP1Q9NQW7 623 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 CNTNAP2Q9UHC6 1331 aa22.5■■□□□ 1.19
DDB1-220ENST00000542337 C19orf67A6NJJ6 358 aa22.49■■□□□ 1.19
DDB1-220ENST00000542337 ST18O60284 1047 aa22.49■■□□□ 1.19
DDB1-220ENST00000542337 HOXA11P31270 313 aaPredicted RBP22.49■■□□□ 1.19
DDB1-220ENST00000542337 CA8P35219 290 aa22.49■■□□□ 1.19
DDB1-220ENST00000542337 RABEP1Q15276 862 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms