RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 FGF18O76093 207 aa24.55■■□□□ 1.52
C2CD3-216ENST00000541922 ARL2P36404 184 aa24.55■■□□□ 1.52
C2CD3-216ENST00000541922 LEXMQ3ZCV2 418 aa24.55■■□□□ 1.52
C2CD3-216ENST00000541922 HAUS3Q68CZ6 603 aa24.55■■□□□ 1.52
C2CD3-216ENST00000541922 C4orf32Q8N8J7 132 aa24.55■■□□□ 1.52
C2CD3-216ENST00000541922 NECAB3Q96P71 396 aaPredicted RBP24.55■■□□□ 1.52
C2CD3-216ENST00000541922 MRPL9Q9BYD2 267 aaKnown RBP24.55■■□□□ 1.52
C2CD3-216ENST00000541922 CLDND1Q9NY35 253 aa24.55■■□□□ 1.52
C2CD3-216ENST00000541922 DBR1Q9UK59 544 aaKnown RBP24.55■■□□□ 1.52
C2CD3-216ENST00000541922 SMC3Q9UQE7 1217 aa24.55■■□□□ 1.52
C2CD3-216ENST00000541922 PCDHB6Q9Y5E3 794 aa24.55■■□□□ 1.52
C2CD3-216ENST00000541922 ZNF623O75123 536 aa24.54■■□□□ 1.52
C2CD3-216ENST00000541922 ERLIN2O94905 339 aa24.54■■□□□ 1.52
C2CD3-216ENST00000541922 FXR2P51116 673 aaKnown RBP eCLIP24.54■■□□□ 1.52
C2CD3-216ENST00000541922 PTENP60484 403 aa24.54■■□□□ 1.52
C2CD3-216ENST00000541922 HYAL1Q12794 435 aa24.54■■□□□ 1.52
C2CD3-216ENST00000541922 PTGDRQ13258 359 aa24.54■■□□□ 1.52
C2CD3-216ENST00000541922 COL19A1Q14993 1142 aa24.54■■□□□ 1.52
C2CD3-216ENST00000541922 POTEGQ6S5H5 508 aa24.54■■□□□ 1.52
C2CD3-216ENST00000541922 KCNT2Q6UVM3 1135 aa24.54■■□□□ 1.52
C2CD3-216ENST00000541922 ASAP3Q8TDY4 903 aa24.54■■□□□ 1.52
C2CD3-216ENST00000541922 LPPQ93052 612 aa24.54■■□□□ 1.52
C2CD3-216ENST00000541922 ZNF558Q96NG5 402 aa24.54■■□□□ 1.52
C2CD3-216ENST00000541922 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.54■■□□□ 1.52
C2CD3-216ENST00000541922 TTC28Q96AY4 2481 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 IRS1P35568 1242 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 POU5F1BQ06416 359 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 PCBP1Q15365 356 aaKnown RBP eCLIP24.53■■□□□ 1.52
C2CD3-216ENST00000541922 LONRF3Q496Y0 759 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 MICAL1Q8TDZ2 1067 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 RSPH1Q8WYR4 309 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 PGBD4Q96DM1 585 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 RAB34Q9BZG1 259 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 POLR3FQ9H1D9 316 aaPredicted RBP24.53■■□□□ 1.52
C2CD3-216ENST00000541922 IGFLR1Q9H665 355 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 LRWD1Q9UFC0 647 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 PCDHB2Q9Y5E7 798 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 VCANP13611 3396 aa24.53■■□□□ 1.52
C2CD3-216ENST00000541922 H3BQ06 376 aaPredicted RBP24.52■■□□□ 1.52
C2CD3-216ENST00000541922 INO80B-WBP1J3KQ70 363 aa24.52■■□□□ 1.52
C2CD3-216ENST00000541922 LAD1O00515 517 aa24.52■■□□□ 1.52
C2CD3-216ENST00000541922 MUTP22033 750 aa24.52■■□□□ 1.52
C2CD3-216ENST00000541922 GLRA2P23416 452 aa24.52■■□□□ 1.52
C2CD3-216ENST00000541922 PPM1AP35813 382 aa24.52■■□□□ 1.52
C2CD3-216ENST00000541922 CCT6AP40227 531 aaKnown RBP24.52■■□□□ 1.52
C2CD3-216ENST00000541922 NCBP1Q09161 790 aaKnown RBP24.52■■□□□ 1.52
C2CD3-216ENST00000541922 CAPSQ13938 189 aa24.52■■□□□ 1.52
C2CD3-216ENST00000541922 PDIA5Q14554 519 aa24.52■■□□□ 1.52
C2CD3-216ENST00000541922 GLB1LQ6UWU2 654 aa24.52■■□□□ 1.52
C2CD3-216ENST00000541922 MAEAQ7L5Y9 396 aa24.52■■□□□ 1.52
C2CD3-216ENST00000541922 IFNLR1Q8IU57 520 aaPredicted RBP24.52■■□□□ 1.52
C2CD3-216ENST00000541922 MCPH1Q8NEM0 835 aa24.52■■□□□ 1.52
C2CD3-216ENST00000541922 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.52■■□□□ 1.52
C2CD3-216ENST00000541922 TLR9Q9NR96 1032 aa24.52■■□□□ 1.52
C2CD3-216ENST00000541922 HOXA11P31270 313 aaPredicted RBP24.51■■□□□ 1.51
C2CD3-216ENST00000541922 PLCB3Q01970 1234 aa24.51■■□□□ 1.51
C2CD3-216ENST00000541922 CTC1Q2NKJ3 1217 aa24.51■■□□□ 1.51
C2CD3-216ENST00000541922 RILPL1Q5EBL4 403 aa24.51■■□□□ 1.51
C2CD3-216ENST00000541922 PUF60Q9UHX1 559 aaKnown RBP24.51■■□□□ 1.51
C2CD3-216ENST00000541922 LZTS1Q9Y250 596 aa24.51■■□□□ 1.51
C2CD3-216ENST00000541922 STK24Q9Y6E0 443 aa24.51■■□□□ 1.51
C2CD3-216ENST00000541922 ARHGEF35A5YM69 484 aa24.5■■□□□ 1.51
C2CD3-216ENST00000541922 AXLP30530 894 aa24.5■■□□□ 1.51
C2CD3-216ENST00000541922 GTF2F1P35269 517 aaKnown RBP eCLIP24.5■■□□□ 1.51
C2CD3-216ENST00000541922 PBX3P40426 434 aa24.5■■□□□ 1.51
C2CD3-216ENST00000541922 KRT17Q04695 432 aa24.5■■□□□ 1.51
C2CD3-216ENST00000541922 PUS10Q3MIT2 529 aaKnown RBP24.5■■□□□ 1.51
C2CD3-216ENST00000541922 PTCRAQ6ISU1 281 aaPredicted RBP24.5■■□□□ 1.51
C2CD3-216ENST00000541922 ADGRD2Q7Z7M1 963 aa24.5■■□□□ 1.51
C2CD3-216ENST00000541922 MRPS27Q92552 414 aaKnown RBP24.5■■□□□ 1.51
C2CD3-216ENST00000541922 NFKBIZQ9BYH8 718 aa24.5■■□□□ 1.51
C2CD3-216ENST00000541922 GPRC5CQ9NQ84 441 aa24.5■■□□□ 1.51
C2CD3-216ENST00000541922 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.5■■□□□ 1.51
C2CD3-216ENST00000541922 SPG21Q9NZD8 308 aa24.5■■□□□ 1.51
C2CD3-216ENST00000541922 INPP5FQ9Y2H2 1132 aa24.5■■□□□ 1.51
C2CD3-216ENST00000541922 MEIS3P2A8K0S8 358 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 TSPAN1O60635 241 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 LTBRP36941 435 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 PRPHP41219 470 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 ALDH7A1P49419 539 aaKnown RBP24.49■■□□□ 1.51
C2CD3-216ENST00000541922 MBTD1Q05BQ5 628 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 NOMO2Q5JPE7 1267 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 UBXN11Q5T124 520 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 LARP1BQ659C4 914 aaKnown RBP24.49■■□□□ 1.51
C2CD3-216ENST00000541922 PDE12Q6L8Q7 609 aaKnown RBP24.49■■□□□ 1.51
C2CD3-216ENST00000541922 NOTUMQ6P988 496 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 PADI6Q6TGC4 694 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 MRPL10Q7Z7H8 261 aaKnown RBP24.49■■□□□ 1.51
C2CD3-216ENST00000541922 IGSF22Q8N9C0 903 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 SNX29Q8TEQ0 813 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 PCDHGC5Q9Y5F6 944 aa24.49■■□□□ 1.51
C2CD3-216ENST00000541922 SPTBN5Q9NRC6 3674 aaKnown RBP24.48■■□□□ 1.51
C2CD3-216ENST00000541922 LRRIQ4A6NIV6 560 aa24.48■■□□□ 1.51
C2CD3-216ENST00000541922 OFD1O75665 1012 aa24.48■■□□□ 1.51
C2CD3-216ENST00000541922 NRIP1P48552 1158 aa24.48■■□□□ 1.51
C2CD3-216ENST00000541922 BCAR1P56945 870 aa24.48■■□□□ 1.51
C2CD3-216ENST00000541922 ERVFC1P60507 584 aa24.48■■□□□ 1.51
C2CD3-216ENST00000541922 RNASELQ05823 741 aaKnown RBP24.48■■□□□ 1.51
C2CD3-216ENST00000541922 ADAM15Q13444 863 aa24.48■■□□□ 1.51
C2CD3-216ENST00000541922 DTHD1Q6ZMT9 781 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms