RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ZBTB10Q96DT7 871 aa10.8□□□□□ -0.68
YBX3-211ENST00000541351 RPS6KC1Q96S38 1066 aa10.8□□□□□ -0.68
YBX3-211ENST00000541351 SDF4Q9BRK5 362 aa10.8□□□□□ -0.68
YBX3-211ENST00000541351 ADAMTS10Q9H324 1103 aa10.8□□□□□ -0.68
YBX3-211ENST00000541351 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.8□□□□□ -0.68
YBX3-211ENST00000541351 KLRF2D3W0D1 207 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 LILRB3O75022 631 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 RFPL2O75678 378 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 SOD2P04179 222 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 EIF4BP23588 611 aaKnown RBP10.79□□□□□ -0.68
YBX3-211ENST00000541351 SF3A2Q15428 464 aaKnown RBP10.79□□□□□ -0.68
YBX3-211ENST00000541351 NOMO2Q5JPE7 1267 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 TMEM173Q86WV6 379 aaPredicted RBP10.79□□□□□ -0.68
YBX3-211ENST00000541351 HOMER1Q86YM7 354 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 MTMR8Q96EF0 704 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 SCLT1Q96NL6 688 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 ARRDC1-AS1Q9H2J1 176 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 CHST12Q9NRB3 414 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 VPS45Q9NRW7 570 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 KANSL3Q9P2N6 904 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 CEP131Q9UPN4 1083 aa10.79□□□□□ -0.68
YBX3-211ENST00000541351 HELZ2Q9BYK8 2649 aaKnown RBP10.79□□□□□ -0.68
YBX3-211ENST00000541351 DOCK8Q8NF50 2099 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 C2CD2LO14523 706 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 HRO43593 1189 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 GAS2O43903 313 aaKnown RBP10.78□□□□□ -0.68
YBX3-211ENST00000541351 XYLBO75191 536 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 NR1I2O75469 434 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 PAPSS2O95340 614 aaPredicted RBP10.78□□□□□ -0.68
YBX3-211ENST00000541351 SEC24BO95487 1268 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 FGAP02671 866 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 CSRP1P21291 193 aaKnown RBP10.78□□□□□ -0.68
YBX3-211ENST00000541351 GLUD2P49448 558 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 RAB27AP51159 221 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 CDC42EP1Q00587 391 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 LRRC32Q14392 662 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 CACNA2D4Q7Z3S7 1137 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 ZNF598Q86UK7 904 aaKnown RBP10.78□□□□□ -0.68
YBX3-211ENST00000541351 SPEM1Q8N4L4 309 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 METTL13Q8N6R0 699 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 ZNF707Q96C28 371 aaPredicted RBP10.78□□□□□ -0.68
YBX3-211ENST00000541351 PGBD4Q96DM1 585 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 TMEM175Q9BSA9 504 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 NRDE2Q9H7Z3 1164 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 CDHR5Q9HBB8 845 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 TBC1D13Q9NVG8 400 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 NDRG2Q9UN36 371 aaKnown RBP10.78□□□□□ -0.68
YBX3-211ENST00000541351 FAN1Q9Y2M0 1017 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 MSRB2Q9Y3D2 182 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 TTC41PQ6P2S7 1318 aa10.78□□□□□ -0.68
YBX3-211ENST00000541351 PNMA6FA0A0J9YX94 578 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 CHURC1-FNTBB4DL54 471 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 BACH1O14867 736 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 AXIN1O15169 862 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 MAGEB2O15479 319 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 TEX28O15482 410 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 ATP9AO75110 1047 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 ECI2O75521 394 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 EPN2O95208 641 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 HNRNPA1P09651 372 aaKnown RBP eCLIP10.77□□□□□ -0.69
YBX3-211ENST00000541351 FNTBP49356 437 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 SH3PXD2AQ5TCZ1 1133 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 LIN9Q5TKA1 542 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 PROSER1Q86XN7 944 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 GPR65Q8IYL9 337 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 FEZF2Q8TBJ5 459 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 MSANTD3Q96H12 275 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 ZSCAN10Q96SZ4 725 aaPredicted RBP10.77□□□□□ -0.69
YBX3-211ENST00000541351 ZKSCAN3Q9BRR0 538 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 UBAC1Q9BSL1 405 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 RPP25Q9BUL9 199 aaKnown RBP10.77□□□□□ -0.69
YBX3-211ENST00000541351 HERC2P3Q9BVR0 1158 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 TRAIPQ9BWF2 469 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 GBP3Q9H0R5 595 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 HEBP1Q9NRV9 189 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 HELLSQ9NRZ9 838 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 WASF3Q9UPY6 502 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 AKT3Q9Y243 479 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 GPSM3Q9Y4H4 160 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 TELO2Q9Y4R8 837 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 LAMA4Q16363 1823 aa10.77□□□□□ -0.69
YBX3-211ENST00000541351 H0Y626 953 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 PIK3CDO00329 1044 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 PPP1R11O60927 126 aaPredicted RBP10.76□□□□□ -0.69
YBX3-211ENST00000541351 GPR32O75388 356 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 ZMYND10O75800 440 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 TRIM16O95361 564 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 RLBP1P12271 317 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 SPINK2P20155 84 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 HOXA6P31267 233 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 SLC11A1P49279 550 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 MFAP1P55081 439 aaKnown RBP10.76□□□□□ -0.69
YBX3-211ENST00000541351 NLRP11P59045 1033 aaKnown RBP10.76□□□□□ -0.69
YBX3-211ENST00000541351 ACTR2P61160 394 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 IFIT1BQ5T764 474 aaKnown RBP10.76□□□□□ -0.69
YBX3-211ENST00000541351 TWF2Q6IBS0 349 aaKnown RBP10.76□□□□□ -0.69
YBX3-211ENST00000541351 FGF13Q92913 245 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 IRF7Q92985 503 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 PPP1R16BQ96T49 567 aa10.76□□□□□ -0.69
YBX3-211ENST00000541351 PCYT2Q99447 389 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms