RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 VTA1Q9NP79 307 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 PCNTO95613 3336 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 EMSYQ7Z589 1322 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 TMEM88BA6NKF7 163 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 SMPD1P17405 629 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 MAPK4P31152 587 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 ARHGAP25P42331 645 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 SMTNP53814 917 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 IRX5P78411 483 aaPredicted RBP13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 CAPSQ13938 189 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 C17orf99Q6UX52 265 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 SYT10Q6XYQ8 523 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 CBWD2Q8IUF1 395 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 GOLGA5Q8TBA6 731 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 ATP8B4Q8TF62 1192 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 AFG1LQ8WV93 481 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 FAM84AQ96KN4 292 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 HAPLN2Q9GZV7 340 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 RNPEPQ9H4A4 650 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 AZI2Q9H6S1 392 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 NRBP2Q9NSY0 501 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 ARHGAP20Q9P2F6 1191 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 TLL2Q9Y6L7 1015 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 SLC15A5A6NIM6 579 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 TTLL13PA6NNM8 815 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 ZNF263O14978 683 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 MAFO75444 373 aaPredicted RBP13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 GJB1P08034 283 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 ZNF286BP0CG31 522 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 CNGA1P29973 690 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 HNRNPH3P31942 346 aaKnown RBP13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 BFSP1Q12934 665 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 CCL14Q16627 93 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 PLPPR4Q7Z2D5 763 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 LRRC71Q8N4P6 559 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 LENG1Q96BZ8 264 aaPredicted RBP13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 TINF2Q9BSI4 451 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 NHEJ1Q9H9Q4 299 aaPredicted RBP13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 C17orf75Q9HAS0 396 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 TRIM10Q9UDY6 481 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 FRMD4BQ9Y2L6 1034 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 FHOD1Q9Y613 1164 aa13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 EPN1Q9Y6I3 576 aaPredicted RBP13.41□□□□□ -0.26
AP003559.1-201ENST00000540906 NDUFA10O95299 355 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 LGALS2P05162 132 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 RFC5P40937 340 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 FMO5P49326 533 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 PPP3CAQ08209 521 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 MYBPC2Q14324 1141 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 KLHDC7AQ5VTJ3 777 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 HGSNATQ68CP4 663 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 XXYLT1Q8NBI6 393 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 TMEM174Q8WUU8 243 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 SLC7A3Q8WY07 619 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 BBXQ8WY36 941 aaPredicted RBP13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 HVCN1Q96D96 273 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 ZNF668Q96K58 619 aaPredicted RBP13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 IFT74Q96LB3 600 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 WDR24Q96S15 920 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 LZTFL1Q9NQ48 299 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 GCNT4Q9P109 453 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 CEP72Q9P209 647 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 ZHX1Q9UKY1 873 aaPredicted RBP13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 PLAGL2Q9UPG8 496 aa13.4□□□□□ -0.26
AP003559.1-201ENST00000540906 IGKV6-21A0A0C4DH24 114 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 RCCD1A6NED2 376 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 LRRIQ4A6NIV6 560 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 RIOK3O14730 519 aaKnown RBP13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 ZSCAN12O43309 604 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 GH1P01241 217 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 CCDC175P0C221 793 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 PNMA6AP0CW24 399 aaPredicted RBP13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 WNT7BP56706 349 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 PPP2R3AQ06190 1150 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 CRHR2Q13324 411 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 EXOC3L4Q17RC7 722 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 PPP1R13LQ8WUF5 828 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 ZBTB45Q96K62 511 aaPredicted RBP13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 SUGCTQ9HAC7 445 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 TOPORSQ9NS56 1045 aaPredicted RBP13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 EIF4A3P38919 411 aaKnown RBP13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 NAMPTP43490 491 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 APLP1P51693 650 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 CYP27A1Q02318 531 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 MAP2K5Q13163 448 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 ACVR2BQ13705 512 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 IQCEQ6IPM2 695 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 GBP6Q6ZN66 633 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 CACNA2D4Q7Z3S7 1137 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 SLC17A8Q8NDX2 589 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 LMO3Q8TAP4 145 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 PRPF31Q8WWY3 499 aaKnown RBP13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 USP6NLQ92738 828 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 FAM167AQ96KS9 214 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 PLCB1Q9NQ66 1216 aa13.39□□□□□ -0.27
AP003559.1-201ENST00000540906 EVPLQ92817 2033 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 UCHL3P15374 230 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 CLCN3P51790 818 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 VAMP7P51809 220 aa13.38□□□□□ -0.27
AP003559.1-201ENST00000540906 ETF1P62495 437 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms