RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 NAGPAQ9UK23 515 aa12.3□□□□□ -0.44
LGR5-203ENST00000540815 GRIN2DO15399 1336 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 GFPT2O94808 682 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 EIF2AK2P19525 551 aaKnown RBP12.29□□□□□ -0.44
LGR5-203ENST00000540815 STAT1P42224 750 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 NBPF12Q5TAG4 269 aaPredicted RBP12.29□□□□□ -0.44
LGR5-203ENST00000540815 GJB7Q6PEY0 223 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 SND1Q7KZF4 910 aaKnown RBP eCLIP12.29□□□□□ -0.441e-6■■■□□ 17.8
LGR5-203ENST00000540815 VPS36Q86VN1 386 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 RNF217Q8TC41 542 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 TIPINQ9BVW5 301 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 TMEM206Q9H813 350 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 PXMP2Q9NR77 195 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 GRID2IPA4D2P6 1211 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 PLS3P13797 630 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 GUCY1A3Q02108 690 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 IFI16Q16666 785 aaKnown RBP12.29□□□□□ -0.44
LGR5-203ENST00000540815 CFAP221Q4G0U5 840 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 ALKBH5Q6P6C2 394 aaKnown RBP12.29□□□□□ -0.44
LGR5-203ENST00000540815 FAM43BQ6ZT52 329 aaPredicted RBP12.29□□□□□ -0.44
LGR5-203ENST00000540815 C12orf56Q8IXR9 622 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 SGSM3Q96HU1 749 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 STK33Q9BYT3 514 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 FZD1Q9UP38 647 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 RLFQ13129 1914 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 COL11A1P12107 1806 aaPredicted RBP12.29□□□□□ -0.44
LGR5-203ENST00000540815 GOLGA6BA6NDN3 693 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 EXOC3O60645 756 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 FTCDO95954 541 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 KRT14P02533 472 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 SOX5P35711 763 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 JAK3P52333 1124 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 BFSP1Q12934 665 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 CBWD6Q4V339 395 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 CBWD3Q5JTY5 395 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 CBWD5Q5RIA9 395 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 DCAF15Q66K64 600 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 RNF207Q6ZRF8 634 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 C4orf19Q8IY42 314 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 OTUD6BQ8N6M0 293 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 ACCSQ96QU6 501 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 PDCD2LQ9BRP1 358 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 ZNF112Q9UJU3 913 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 INTUQ9ULD6 942 aa12.29□□□□□ -0.44
LGR5-203ENST00000540815 PHIPQ8WWQ0 1821 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 LTBP3Q9NS15 1303 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 F8VZ95 297 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 VWA5AO00534 786 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 MYCLP12524 364 aaPredicted RBP12.28□□□□□ -0.44
LGR5-203ENST00000540815 YWHABP31946 246 aaKnown RBP12.28□□□□□ -0.44
LGR5-203ENST00000540815 MYL7Q01449 175 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 XRRA1Q6P2D8 792 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 FMNL3Q8IVF7 1028 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 RMDN3Q96TC7 470 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 LRRC1Q9BTT6 524 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 INTS2Q9H0H0 1204 aaKnown RBP12.28□□□□□ -0.44
LGR5-203ENST00000540815 ST6GALNAC4Q9H4F1 302 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 CNOT7Q9UIV1 285 aaKnown RBP12.28□□□□□ -0.44
LGR5-203ENST00000540815 DNAJC12Q9UKB3 198 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 EIF4E1BA6NMX2 242 aaKnown RBP12.28□□□□□ -0.44
LGR5-203ENST00000540815 CES2O00748 559 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 TRIM49P0CI25 452 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 TRIM49CP0CI26 452 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 SFNP31947 248 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 BACE1P56817 501 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 SPRED3Q2MJR0 410 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 GLE1Q53GS7 698 aaKnown RBP12.28□□□□□ -0.44
LGR5-203ENST00000540815 PRAMEF18Q5VWM3 479 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 MAEAQ7L5Y9 396 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 SCYL3Q8IZE3 742 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 CABS1Q96KC9 395 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 SCLT1Q96NL6 688 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 AS3MTQ9HBK9 375 aa12.28□□□□□ -0.44
LGR5-203ENST00000540815 A0A0A6YYK5 440 aaPredicted RBP12.27□□□□□ -0.44
LGR5-203ENST00000540815 TMEM150BA6NC51 233 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 WDR64B1ANS9 1081 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 DDX3XO00571 662 aaKnown RBP eCLIP12.27□□□□□ -0.443e-21■□□□□ 9.7
LGR5-203ENST00000540815 EVI5O60447 810 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 RFX1P22670 979 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 FNTAP49354 379 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 PSMC5P62195 406 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 SNRPFP62306 86 aaKnown RBP12.27□□□□□ -0.44
LGR5-203ENST00000540815 KRT76Q01546 638 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 BIRC2Q13490 618 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 PLS1Q14651 629 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 UGCGQ16739 394 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 ARHGEF16Q5VV41 709 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 TSEN2Q8NCE0 465 aaKnown RBP12.27□□□□□ -0.44
LGR5-203ENST00000540815 MIEF2Q96C03 454 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 ATG4CQ96DT6 458 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 MS4A14Q96JA4 679 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 GPR88Q9GZN0 384 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 APEX2Q9UBZ4 518 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 DMGDHQ9UI17 866 aaKnown RBP12.27□□□□□ -0.44
LGR5-203ENST00000540815 RIPK3Q9Y572 518 aa12.27□□□□□ -0.44
LGR5-203ENST00000540815 WDR81Q562E7 1941 aa12.27□□□□□ -0.45
LGR5-203ENST00000540815 EIF3HO15372 352 aaKnown RBP eCLIP12.27□□□□□ -0.451e-7■■□□□ 13.1
LGR5-203ENST00000540815 ATP9AO75110 1047 aa12.27□□□□□ -0.45
LGR5-203ENST00000540815 H2AFZP0C0S5 128 aa12.27□□□□□ -0.45
LGR5-203ENST00000540815 KRT13P13646 458 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms