RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 AGXT2Q9BYV1 514 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 UNC45AQ9H3U1 944 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 SFXN1Q9H9B4 322 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 C6orf50Q9HD87 102 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 NRBP2Q9NSY0 501 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 DNAJB4Q9UDY4 337 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 DUSP12Q9UNI6 340 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 ACACBO00763 2458 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 C2orf16Q68DN1 1984 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 CYP3A7-CYP3A51PA0A087WV96 503 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 A0A087WZ62 844 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 TMEM150BA6NC51 233 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 INPPL1O15357 1258 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 MAFO75444 373 aaPredicted RBP8.23□□□□□ -1.09
YBX3-209ENST00000540747 CNPP09543 421 aaKnown RBP8.23□□□□□ -1.09
YBX3-209ENST00000540747 CYP3A7P24462 503 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 SFNP31947 248 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 RAB27AP51159 221 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 USP11P51784 963 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 AFF1P51825 1210 aaKnown RBP8.23□□□□□ -1.09
YBX3-209ENST00000540747 JAK3P52333 1124 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 CDC42EP1Q00587 391 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 TBC1D8BQ0IIM8 1120 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 TDGQ13569 410 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 XKR3Q5GH77 459 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 NOMO2Q5JPE7 1267 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 RNF20Q5VTR2 975 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 AGMOQ6ZNB7 445 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 C15orf39Q6ZRI6 1047 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 OTOP3Q7RTS5 596 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 MRPL10Q7Z7H8 261 aaKnown RBP8.23□□□□□ -1.09
YBX3-209ENST00000540747 ZNF410Q86VK4 478 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 PPFIBP1Q86W92 1011 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 ZNF280BQ86YH2 543 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 CCDC12Q8WUD4 166 aaPredicted RBP8.23□□□□□ -1.09
YBX3-209ENST00000540747 NLRP7Q8WX94 980 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 GJA10Q969M2 543 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 KLHL5Q96PQ7 755 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 FDXACB1Q9BRP7 624 aaPredicted RBP8.23□□□□□ -1.09
YBX3-209ENST00000540747 GCOM2Q9BZD3 368 aaPredicted RBP8.23□□□□□ -1.09
YBX3-209ENST00000540747 KCNK12Q9HB15 430 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 IFT122Q9HBG6 1241 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 FAM105AQ9NUU6 356 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 DBR1Q9UK59 544 aaKnown RBP8.23□□□□□ -1.09
YBX3-209ENST00000540747 SPTBN2O15020 2390 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 DOCK8Q8NF50 2099 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 CACNA1BQ00975 2339 aa8.23□□□□□ -1.09
YBX3-209ENST00000540747 KMT2BQ9UMN6 2715 aaPredicted RBP8.23□□□□□ -1.09
YBX3-209ENST00000540747 KRBA1A5PL33 1030 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 M0R2N6 131 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 GAS7O60861 476 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 DDHD2O94830 711 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 SKIP12755 728 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 SFPQP23246 707 aaKnown RBP eCLIP8.22□□□□□ -1.09
YBX3-209ENST00000540747 GNA11P29992 359 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 HOXA11P31270 313 aaPredicted RBP8.22□□□□□ -1.09
YBX3-209ENST00000540747 EVCP57679 992 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 BMS1Q14692 1282 aaKnown RBP8.22□□□□□ -1.09
YBX3-209ENST00000540747 ANGPT1Q15389 498 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 NPY5RQ15761 445 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 LETM2Q2VYF4 491 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 Q4G0T1 1027 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 BMP2KLQ5H9B9 411 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 UBXN11Q5T124 520 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 LRCH2Q5VUJ6 765 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 GLB1LQ6UWU2 654 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 CCDC149Q6ZUS6 474 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 ANO5Q75V66 913 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 CABP7Q86V35 215 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 ADSSL1Q8N142 457 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 DTWD2Q8NBA8 298 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 ETNPPLQ8TBG4 499 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 ZNF707Q96C28 371 aaPredicted RBP8.22□□□□□ -1.09
YBX3-209ENST00000540747 CCDC136Q96JN2 1154 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 RTP3Q9BQQ7 232 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 TMEM175Q9BSA9 504 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 AGPAT5Q9NUQ2 364 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 MARCH5Q9NX47 278 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 IGSF9Q9P2J2 1179 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 EPS15L1Q9UBC2 864 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 STK39Q9UEW8 545 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 TCEAL9Q9UHQ7 104 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 PIN4Q9Y237 131 aaKnown RBP8.22□□□□□ -1.09
YBX3-209ENST00000540747 SAMM50Q9Y512 469 aa8.22□□□□□ -1.09
YBX3-209ENST00000540747 CCDC196A0A1B0GTZ2 297 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 CHMP2AO43633 222 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 NARSO43776 548 aaKnown RBP8.21□□□□□ -1.1
YBX3-209ENST00000540747 C1RP00736 705 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 HMGB1P09429 215 aaKnown RBP8.21□□□□□ -1.1
YBX3-209ENST00000540747 CPA1P15085 419 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 IFNAR1P17181 557 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 DSC1Q08554 894 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 KRT32Q14532 448 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 MTERF2Q49AM1 385 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 TWF2Q6IBS0 349 aaKnown RBP8.21□□□□□ -1.1
YBX3-209ENST00000540747 POTEGQ6S5H5 508 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 MOXD1Q6UVY6 613 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 CYP26C1Q6V0L0 522 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 KSR1Q8IVT5 923 aa8.21□□□□□ -1.1
YBX3-209ENST00000540747 SIX5Q8N196 739 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms