RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 FAM76AQ8TAV0 307 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 HMX1Q9NP08 348 aaPredicted RBP15.26■□□□□ 0.03
COLCA1-204ENST00000540738 UBN1Q9NPG3 1134 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 M0QYV0 167 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 TMEM132DQ14C87 1099 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 APPL2Q8NEU8 664 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 GDAP1Q8TB36 358 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.26■□□□□ 0.03
COLCA1-204ENST00000540738 PLS3P13797 630 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 CA4P22748 312 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 TM4SF1P30408 202 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 SDC4P31431 198 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 TRIM72Q6ZMU5 477 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 TMEM169Q96HH4 297 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 CARD6Q9BX69 1037 aa15.26■□□□□ 0.03
COLCA1-204ENST00000540738 A0A087WWV3 80 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 EHHADHQ08426 723 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 RGMBQ6NW40 437 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 DARS2Q6PI48 645 aaKnown RBP15.25■□□□□ 0.03
COLCA1-204ENST00000540738 C15orf52Q6ZUT6 534 aaKnown RBP15.25■□□□□ 0.03
COLCA1-204ENST00000540738 SAAL1Q96ER3 474 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 COLEC11Q9BWP8 271 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 PDXKO00764 312 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 PRRG1O14668 218 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 SGO2Q562F6 1265 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 SH3TC2Q8TF17 1288 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 FAM163AQ96GL9 167 aaPredicted RBP15.25■□□□□ 0.03
COLCA1-204ENST00000540738 MSCO60682 206 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 TFDP2Q14188 446 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 DESI2Q9BSY9 194 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 AKR1A1P14550 325 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 ALDH7A1P49419 539 aaKnown RBP15.25■□□□□ 0.03
COLCA1-204ENST00000540738 DCAF4L1Q3SXM0 396 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 FBXL13Q8NEE6 735 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 LRRC4BQ9NT99 713 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 ATP11BQ9Y2G3 1177 aa15.25■□□□□ 0.03
COLCA1-204ENST00000540738 NEMP1O14524 444 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 PCSK1P29120 753 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 SNRPFP62306 86 aaKnown RBP15.24■□□□□ 0.03
COLCA1-204ENST00000540738 HVCN1Q96D96 273 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 A6NNZ2 444 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 TUBB8Q3ZCM7 444 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 C3orf67Q6ZVT6 689 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 TTC25Q96NG3 672 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 JRKLQ9Y4A0 524 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 UBR1Q8IWV7 1749 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 ACTR2P61160 394 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 TRPV6Q9H1D0 765 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 C17orf75Q9HAS0 396 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 CEP72Q9P209 647 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 DAAM1Q9Y4D1 1078 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 CD2BP2O95400 341 aaKnown RBP15.24■□□□□ 0.03
COLCA1-204ENST00000540738 CDC25BP30305 580 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 TSTA3Q13630 321 aaPredicted RBP15.24■□□□□ 0.03
COLCA1-204ENST00000540738 SV2CQ496J9 727 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 MAGOHBQ96A72 148 aaKnown RBP15.24■□□□□ 0.03
COLCA1-204ENST00000540738 SAMSN1Q9NSI8 373 aaKnown RBP15.24■□□□□ 0.03
COLCA1-204ENST00000540738 DDX41Q9UJV9 622 aaKnown RBP15.24■□□□□ 0.03
COLCA1-204ENST00000540738 CNTNAP5Q8WYK1 1306 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 ZNF189O75820 626 aaPredicted RBP15.24■□□□□ 0.03
COLCA1-204ENST00000540738 THOC5Q13769 683 aaKnown RBP15.24■□□□□ 0.03
COLCA1-204ENST00000540738 CDO1Q16878 200 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 ATF7IP2Q5U623 682 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 AGAP1Q9UPQ3 857 aa15.24■□□□□ 0.03
COLCA1-204ENST00000540738 YWHAGP61981 247 aaKnown RBP eCLIP15.23■□□□□ 0.03
COLCA1-204ENST00000540738 KCNH2Q12809 1159 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 KIAA1755Q5JYT7 1200 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 GPT2Q8TD30 523 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 SYT17Q9BSW7 474 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.23■□□□□ 0.03
COLCA1-204ENST00000540738 DPP7Q9UHL4 492 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 MAGED2Q9UNF1 606 aaPredicted RBP15.23■□□□□ 0.03
COLCA1-204ENST00000540738 ADORA2BP29275 332 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 GRIK1P39086 918 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 TRIM56Q9BRZ2 755 aaKnown RBP15.23■□□□□ 0.03
COLCA1-204ENST00000540738 VTA1Q9NP79 307 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 MROH1Q8NDA8 1641 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 IGSF9BQ9UPX0 1349 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 ZBED1O96006 694 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 PGK2P07205 417 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 OR1G1P47890 313 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 RBL2Q08999 1139 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 ALKBH5Q6P6C2 394 aaKnown RBP15.23■□□□□ 0.03
COLCA1-204ENST00000540738 MOXD1Q6UVY6 613 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 MTG1Q9BT17 334 aaPredicted RBP15.23■□□□□ 0.03
COLCA1-204ENST00000540738 TGFB3P10600 412 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 RAG1P15918 1043 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 TMEM62Q0P6H9 643 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 STKLD1Q8NE28 680 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 SCYL1Q96KG9 808 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 TSPYL2Q9H2G4 693 aaPredicted RBP15.23■□□□□ 0.03
COLCA1-204ENST00000540738 ABHD16BQ9H3Z7 469 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 DYRK4Q9NR20 520 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.23■□□□□ 0.03
COLCA1-204ENST00000540738 SYNPO2Q9UMS6 1093 aa15.23■□□□□ 0.03
COLCA1-204ENST00000540738 GUCY1A2P33402 732 aa15.22■□□□□ 0.03
COLCA1-204ENST00000540738 CDK17Q00537 523 aa15.22■□□□□ 0.03
COLCA1-204ENST00000540738 GNA15P30679 374 aa15.22■□□□□ 0.03
COLCA1-204ENST00000540738 EIF4A3P38919 411 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms