RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 MCF2L2Q86YR7 1114 aa10.67□□□□□ -0.7
PHC1-208ENST00000540574 TMEM143Q96AN5 459 aa10.67□□□□□ -0.7
PHC1-208ENST00000540574 PBKQ96KB5 322 aa10.67□□□□□ -0.7
PHC1-208ENST00000540574 TAF1DQ9H5J8 278 aaPredicted RBP10.67□□□□□ -0.7
PHC1-208ENST00000540574 HSPBP1Q9NZL4 362 aa10.67□□□□□ -0.7
PHC1-208ENST00000540574 APEX2Q9UBZ4 518 aa10.67□□□□□ -0.7
PHC1-208ENST00000540574 SERPINA10Q9UK55 444 aa10.67□□□□□ -0.7
PHC1-208ENST00000540574 PDE4DIPQ5VU43 2346 aa10.67□□□□□ -0.7
PHC1-208ENST00000540574 GOLGA8SH3BPF8 625 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 MYO1FO00160 1098 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 CTNND1O60716 968 aaKnown RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 NOL4O94818 638 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 FGFR4P22455 802 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 PIK3CAP42336 1068 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 LRRC14Q15048 493 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 OTOP1Q7RTM1 612 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 IL31RAQ8NI17 732 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 C11orf70Q9BRQ4 267 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 RPAP3Q9H6T3 665 aaPredicted RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 NXF1Q9UBU9 619 aaKnown RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 PCDHB4Q9Y5E5 795 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 FAM169AQ9Y6X4 670 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 NOP56O00567 594 aaKnown RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 SYF2O95926 243 aaKnown RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 EPHA7Q15375 998 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 RSBN1LQ6PCB5 846 aaPredicted RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 PNMA8AQ86V59 439 aaPredicted RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 CPA5Q8WXQ8 436 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 ATG4CQ96DT6 458 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 P2RX7Q99572 595 aaKnown RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 KCNMB3Q9NPA1 279 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 CNOT8Q9UFF9 292 aaKnown RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 HERC5Q9UII4 1024 aaKnown RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 TTC7AQ9ULT0 858 aaPredicted RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 DDX3XO00571 662 aaKnown RBP eCLIP10.66□□□□□ -0.7
PHC1-208ENST00000540574 DPEP1P16444 411 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 NSFP46459 744 aaKnown RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 MFAP3P55082 362 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 RRP1BQ14684 758 aaKnown RBP10.66□□□□□ -0.7
PHC1-208ENST00000540574 SGO2Q562F6 1265 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 MCTP2Q6DN12 878 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 MMGT1Q8N4V1 131 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 TPCN2Q8NHX9 752 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 MDM1Q8TC05 714 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 SPIRE2Q8WWL2 714 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 NUP85Q9BW27 656 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 STK24Q9Y6E0 443 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 PITPNM2Q9BZ72 1349 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 USP54Q70EL1 1684 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 CASZ1Q86V15 1759 aa10.66□□□□□ -0.7
PHC1-208ENST00000540574 TRPC3Q13507 836 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 HGSNATQ68CP4 663 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 GADL1Q6ZQY3 521 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 INTS8Q75QN2 995 aaKnown RBP10.65□□□□□ -0.7
PHC1-208ENST00000540574 SRLQ86TD4 932 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 FAM160B2Q86V87 743 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 RBM46Q8TBY0 533 aaKnown RBP10.65□□□□□ -0.7
PHC1-208ENST00000540574 PPP1R9AQ9ULJ8 1098 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 ALG6Q9Y672 507 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 COL4A1P02462 1669 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 BCL9LQ86UU0 1499 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 SPDYE2BA6NHP3 402 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 PEX10O60683 326 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 SGPL1O95470 568 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 SPDYE6P0CI01 402 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 MKRN3Q13064 507 aaKnown RBP10.65□□□□□ -0.7
PHC1-208ENST00000540574 SYCP2LQ5T4T6 812 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 DAB2IPQ5VWQ8 1189 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 ZNF720Q7Z2F6 126 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
PHC1-208ENST00000540574 ARHGEF26Q96DR7 871 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 AGPAT1Q99943 283 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 EDEM3Q9BZQ6 932 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 KCTD10Q9H3F6 313 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 TMEM206Q9H813 350 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 RNF14Q9UBS8 474 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 AGTPBP1Q9UPW5 1226 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 MYH15Q9Y2K3 1946 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 SPATA31A6Q5VVP1 1343 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 PI4K2BG5E9Z4 385 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 THAP12O43422 761 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 SNHG28P0DPA3 235 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 TFAMQ00059 246 aaKnown RBP10.65□□□□□ -0.7
PHC1-208ENST00000540574 ALS2CLQ60I27 953 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 TMEM270Q6UE05 265 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 THNSL1Q8IYQ7 743 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 ZSWIM2Q8NEG5 633 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 GDAP1Q8TB36 358 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 ETNPPLQ8TBG4 499 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 FAM151AQ8WW52 585 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 RFFLQ8WZ73 363 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 MXRA8Q9BRK3 442 aa10.65□□□□□ -0.7
PHC1-208ENST00000540574 POC1B-GALNT4F8VUJ3 575 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 ENTPD3O75355 529 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 TNFAIP1Q13829 316 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 ZNF564Q8TBZ8 553 aaPredicted RBP10.64□□□□□ -0.71
PHC1-208ENST00000540574 WHAMMQ8TF30 809 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 STK33Q9BYT3 514 aa10.64□□□□□ -0.71
PHC1-208ENST00000540574 AJAP1Q9UKB5 411 aaPredicted RBP10.64□□□□□ -0.71
PHC1-208ENST00000540574 ZNF148Q9UQR1 794 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms