RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 RRAGBQ5VZM2 374 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 CDCA2Q69YH5 1023 aaPredicted RBP7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 ADALQ6DHV7 355 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 CCDC73Q6ZRK6 1079 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 MAEAQ7L5Y9 396 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 GPBP1Q86WP2 473 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 PDILTQ8N807 584 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 RNF149Q8NC42 400 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 LINC01599Q8WXQ3 324 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 KIFAP3Q92845 792 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 DRC1Q96MC2 740 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 REEP2Q9BRK0 252 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 TIPINQ9BVW5 301 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 NFKBIZQ9BYH8 718 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 GCOM2Q9BZD3 368 aaPredicted RBP7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 MTIF3Q9H2K0 278 aaKnown RBP7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 TMX1Q9H3N1 280 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 MINDY3Q9H8M7 445 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 HPSEQ9Y251 543 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 TDRD15B5MCY1 1934 aaKnown RBP7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 ADGRA3Q8IWK6 1321 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 ATG2AQ2TAZ0 1938 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 NPHP3-ACAD11A0A0J9YXS1 232 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 ABHD14A-ACY1A0A1B0GW23 586 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 A0A1W2PQ27 194 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 A0A1W2PQ64 194 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 A0A1W2PQD8 194 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 ZBBXA8MT70 800 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 GPR182O15218 404 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 MGEA5O60502 916 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 EFCAB14O75071 495 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 CSDE1O75534 798 aaKnown RBP7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 SRGAP2CP0DJJ0 459 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 FGFR4P22455 802 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 SFPQP23246 707 aaKnown RBP eCLIP7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 CMA1P23946 247 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 NAMPTP43490 491 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 PHKA2P46019 1235 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 PTENP60484 403 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 DEFB103AP81534 67 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 MBTD1Q05BQ5 628 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 RAD51AP2Q09MP3 1159 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 NFX1Q12986 1120 aaKnown RBP7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 IKBKEQ14164 716 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 TFDP1Q14186 410 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 DHX8Q14562 1220 aaKnown RBP7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 ODR4Q5SWX8 454 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 FAM109BQ6ICB4 259 aaPredicted RBP7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 FAM43BQ6ZT52 329 aaPredicted RBP7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 SRGAP1Q7Z6B7 1085 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 FTHL17Q9BXU8 183 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 PANK2Q9BZ23 570 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 INO80BQ9C086 356 aaPredicted RBP7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 CCDC113Q9H0I3 377 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 TNMDQ9H2S6 317 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 CUEDC2Q9H467 287 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 GOLPH3LQ9H4A5 285 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 POLD4Q9HCU8 107 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 KBTBD4Q9NVX7 518 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 FAM13BQ9NYF5 915 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 ODF2LQ9ULJ1 636 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 ST3GAL5Q9UNP4 418 aa7.72□□□□□ -1.17
LPCAT3-209ENST00000540060 ANK1P16157 1881 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 A0A1B0GVL5 298 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 MYMKA6NI61 221 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 LRRIQ4A6NIV6 560 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 POLR2DO15514 142 aaKnown RBP7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 ACTN4O43707 911 aaKnown RBP7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 TSPAN1O60635 241 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 PLS3P13797 630 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 NPTX2P47972 431 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 KCNJ6P48051 423 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 NDUFA8P51970 172 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 ZNF131P52739 623 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 PEX3P56589 373 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 DMP1Q13316 513 aaPredicted RBP7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 GIT2Q14161 759 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 DSC3Q14574 896 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 PPP2R5AQ15172 486 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 PCBP1Q15365 356 aaKnown RBP eCLIP7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 AMHR2Q16671 573 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 LRIT3Q3SXY7 679 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 SV2BQ7L1I2 683 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 IQUBQ8NA54 791 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 TMEM87AQ8NBN3 555 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 MRPS27Q92552 414 aaKnown RBP7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 DHX58Q96C10 678 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 DNAJC19Q96DA6 116 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 IFT74Q96LB3 600 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 SLC9A7Q96T83 725 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 PYM1Q9BRP8 204 aaKnown RBP7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 KIFC3Q9BVG8 833 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 C2orf40Q9H1Z8 148 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 C17orf75Q9HAS0 396 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 MAGEF1Q9HAY2 307 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 AGPAT5Q9NUQ2 364 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 ARHGAP28Q9P2N2 729 aa7.71□□□□□ -1.18
LPCAT3-209ENST00000540060 KCNH3Q9ULD8 1083 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms