RNA–Protein interactions for RNA: ENST00000539994.5

GTF2H3-208, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 4

Gene GTF2H3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-208ENST00000539994 GLTPD2A6NH11 291 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 ABLIM3O94929 683 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 MT-CO1P00395 513 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 KRT18P05783 430 aaKnown RBP4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 MYBL2P10244 700 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 ERVK-21P61565 698 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 PAK1Q13153 545 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 BIRC2Q13490 618 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 KIZQ2M2Z5 673 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 NT5DC1Q5TFE4 455 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 RCSD1Q6JBY9 416 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 Q7L0L9 218 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 CBARPQ8N350 705 aaPredicted RBP4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 CISD2Q8N5K1 135 aaKnown RBP4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 MAGEB6Q8N7X4 407 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 JPH3Q8WXH2 748 aaPredicted RBP4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 RPS6KC1Q96S38 1066 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 ARNT2Q9HBZ2 717 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 VTA1Q9NP79 307 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 NRXN1Q9ULB1 1477 aa4.81□□□□□ -1.64
GTF2H3-208ENST00000539994 OVOS2A0A0G2JMS6 1433 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 OVOS2A0A0J9YW53 1432 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 OVOS2Q6IE36 1432 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 SPATA31E1Q6ZUB1 1445 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 PIK3C2AO00443 1686 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 CFAP47Q6ZTR5 3102 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 PTPDC1A2A3K4 754 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 CCDC66A2RUB6 948 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 K7ESF4 209 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 EIF5BO60841 1220 aaKnown RBP4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 ULK1O75385 1050 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 RFPL1O75677 317 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 MYL1P05976 194 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 ATP2A2P16615 1042 aaKnown RBP4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 ZSCAN20P17040 1043 aaPredicted RBP4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 NOP2P46087 812 aaKnown RBP4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 DNM2P50570 870 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 MECP2P51608 486 aaKnown RBP4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 KPNA1P52294 538 aaPredicted RBP4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 FOXO4P98177 505 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 TMEM62Q0P6H9 643 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 FAM47CQ5HY64 1035 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 ERICH6BQ5W0A0 696 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 MBLAC2Q68D91 279 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 OVCH1Q7RTY7 1134 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 SAPCD2Q86UD0 394 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 C11orf74Q86VG3 221 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 RCBTB1Q8NDN9 531 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 MENTQ9BUN1 341 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 BCAS3Q9H6U6 928 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 IPPKQ9H8X2 491 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 H2AFY2Q9P0M6 372 aaPredicted RBP4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 PPARGC1AQ9UBK2 798 aaKnown RBP4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 IP6K2Q9UHH9 426 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 ABT1Q9ULW3 272 aaKnown RBP4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 LUC7L2Q9Y383 392 aaKnown RBP4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 PLEKHH2Q8IVE3 1493 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 SSH2Q76I76 1423 aa4.8□□□□□ -1.64
GTF2H3-208ENST00000539994 LRRC37A3O60309 1634 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 NPHP3-ACAD11A0A0J9YXS1 232 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 GOLGA6CA6NDK9 693 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 GOLGA6BA6NDN3 693 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 FZD9O00144 591 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 SRGAP3O43295 1099 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 EIF3JO75822 258 aaKnown RBP4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 SOD2P04179 222 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 GSTM1P09488 218 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 CT47B1P0C2W7 299 aaPredicted RBP4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 GOLGA6DP0CG33 693 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 PAMP19021 973 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 GRK2P25098 689 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 TACR1P25103 407 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 ITGB8P26012 769 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 GRK3P35626 688 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 OCRLQ01968 901 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 TCIRG1Q13488 830 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 NR1I3Q14994 352 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 PKN2Q16513 984 aaKnown RBP4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 INF2Q27J81 1249 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 SYCP2LQ5T4T6 812 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 EEF1DP3Q658K8 133 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 CREB3L3Q68CJ9 461 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 PPP4R4Q6NUP7 873 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 SLC4A10Q6U841 1118 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 CLRN3Q8NCR9 226 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 AHCYL2Q96HN2 611 aaKnown RBP4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 FUBP3Q96I24 572 aaKnown RBP eCLIP4.79□□□□□ -1.641e-8■■■■■ 27.5
GTF2H3-208ENST00000539994 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 RXFP1Q9HBX9 757 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 GOLGA6AQ9NYA3 693 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 FBLN5Q9UBX5 448 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 FBXL7Q9UJT9 491 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 PCDHA2Q9Y5H9 948 aa4.79□□□□□ -1.64
GTF2H3-208ENST00000539994 BRD4O60885 1362 aaPredicted RBP4.78□□□□□ -1.64
GTF2H3-208ENST00000539994 LRPPRCP42704 1394 aaKnown RBP4.78□□□□□ -1.64
GTF2H3-208ENST00000539994 RPTORQ8N122 1335 aa4.78□□□□□ -1.64
GTF2H3-208ENST00000539994 SH3D21A4FU49 640 aa4.78□□□□□ -1.64
GTF2H3-208ENST00000539994 WNT9AO14904 365 aa4.78□□□□□ -1.64
GTF2H3-208ENST00000539994 PFKLP17858 780 aa4.78□□□□□ -1.64
GTF2H3-208ENST00000539994 TNFRSF1AP19438 455 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms