RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 TRIM21P19474 475 aaKnown RBP18.47■□□□□ 0.55
COPS3-212ENST00000539941 RGS2P41220 211 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 ADCYAP1R1P41586 468 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 NAMPTP43490 491 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 GOLGA8FQ08AF8 430 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 GOLGA8DPQ0D2H9 430 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 CRHR2Q13324 411 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 PLCB4Q15147 1175 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 OLFML2BQ68BL8 750 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 FAM186BQ8IYM0 893 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 CPLX3Q8WVH0 158 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 BORCS6Q96GS4 357 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 ERAP1Q9NZ08 941 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 ARHGAP28Q9P2N2 729 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 LUC7L2Q9Y383 392 aaKnown RBP18.47■□□□□ 0.55
COPS3-212ENST00000539941 DENND3A2RUS2 1198 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 MAPK13O15264 365 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 PCMTD1Q96MG8 357 aaPredicted RBP18.47■□□□□ 0.55
COPS3-212ENST00000539941 EDEM3Q9BZQ6 932 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 ABHD10Q9NUJ1 306 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 DOCK3Q8IZD9 2030 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 TTC26A0AVF1 554 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 CCP110O43303 1012 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 PPFIA4O75335 1185 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 AFPP02771 609 aaKnown RBP18.46■□□□□ 0.55
COPS3-212ENST00000539941 HOXD8P13378 290 aaPredicted RBP18.46■□□□□ 0.55
COPS3-212ENST00000539941 KRT9P35527 623 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 CASP4P49662 377 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 SOX10P56693 466 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 KCNH2Q12809 1159 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 TMEM63BQ5T3F8 832 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 TRIM50Q86XT4 487 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 TCP11Q8WWU5 503 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 ABHD8Q96I13 439 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 APBA2Q99767 749 aa18.46■□□□□ 0.55
COPS3-212ENST00000539941 LGALS2P05162 132 aa18.45■□□□□ 0.54
COPS3-212ENST00000539941 CYP2J2P51589 502 aa18.45■□□□□ 0.54
COPS3-212ENST00000539941 IER5Q5VY09 327 aa18.45■□□□□ 0.54
COPS3-212ENST00000539941 ZNF397Q8NF99 534 aaPredicted RBP18.45■□□□□ 0.54
COPS3-212ENST00000539941 OR8K1Q8NGG5 319 aa18.45■□□□□ 0.54
COPS3-212ENST00000539941 DNAJC7Q99615 494 aa18.45■□□□□ 0.54
COPS3-212ENST00000539941 IGKV6-21A0A0C4DH24 114 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 TNPO2O14787 897 aaKnown RBP18.44■□□□□ 0.54
COPS3-212ENST00000539941 EXOC3O60645 756 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 TBC1D8O95759 1140 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 SMPD1P17405 629 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 GLRA2P23416 452 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 MARK3P27448 753 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 ZBED6P86452 979 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 TSR1Q2NL82 804 aaKnown RBP18.44■□□□□ 0.54
COPS3-212ENST00000539941 BRDTQ58F21 947 aaPredicted RBP18.44■□□□□ 0.54
COPS3-212ENST00000539941 ZNF484Q5JVG2 852 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 C17orf53Q8N3J3 647 aaPredicted RBP18.44■□□□□ 0.54
COPS3-212ENST00000539941 AFG1LQ8WV93 481 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 TMEM143Q96AN5 459 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 IKZF4Q9H2S9 585 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 CALCOCO1Q9P1Z2 691 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 GJD2Q9UKL4 321 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 ZNF215Q9UL58 517 aaPredicted RBP18.44■□□□□ 0.54
COPS3-212ENST00000539941 TRPC6Q9Y210 931 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 ADGRA3Q8IWK6 1321 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.44■□□□□ 0.54
COPS3-212ENST00000539941 GTPBP10A4D1E9 387 aaKnown RBP18.44■□□□□ 0.54
COPS3-212ENST00000539941 ZBTB42B2RXF5 422 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 GJC2Q5T442 439 aaPredicted RBP18.44■□□□□ 0.54
COPS3-212ENST00000539941 TMTC1Q8IUR5 882 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 CCAR2Q8N163 923 aaKnown RBP18.44■□□□□ 0.54
COPS3-212ENST00000539941 XXYLT1Q8NBI6 393 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 NEK11Q8NG66 645 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 DEPTORQ8TB45 409 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 ASAP3Q8TDY4 903 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 SLC35C1Q96A29 364 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 KIFC3Q9BVG8 833 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 MCOLN1Q9GZU1 580 aa18.44■□□□□ 0.54
COPS3-212ENST00000539941 SIP14410 1827 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 COL1A2P08123 1366 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 PHLPP2Q6ZVD8 1323 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 KLK7P49862 253 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 TNFAIP2Q03169 654 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 KCNMA1Q12791 1236 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 MXD4Q14582 209 aaPredicted RBP18.43■□□□□ 0.54
COPS3-212ENST00000539941 CYP26C1Q6V0L0 522 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 INTS8Q75QN2 995 aaKnown RBP18.43■□□□□ 0.54
COPS3-212ENST00000539941 OR6J1Q8NGC5 347 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 TMEM134Q9H6X4 195 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 MMRN2Q9H8L6 949 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 HSPBP1Q9NZL4 362 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 MGAMO43451 1857 aa18.43■□□□□ 0.54
COPS3-212ENST00000539941 RNF225M0QZC1 329 aaPredicted RBP18.42■□□□□ 0.54
COPS3-212ENST00000539941 IGHA2P01877 340 aa18.42■□□□□ 0.54
COPS3-212ENST00000539941 KRT13P13646 458 aa18.42■□□□□ 0.54
COPS3-212ENST00000539941 GARTP22102 1010 aa18.42■□□□□ 0.54
COPS3-212ENST00000539941 CNGA1P29973 690 aa18.42■□□□□ 0.54
COPS3-212ENST00000539941 MCCD1P59942 119 aaPredicted RBP18.42■□□□□ 0.54
COPS3-212ENST00000539941 STRN3Q13033 797 aa18.42■□□□□ 0.54
COPS3-212ENST00000539941 DCAF17Q5H9S7 520 aaPredicted RBP18.42■□□□□ 0.54
COPS3-212ENST00000539941 E4F1Q66K89 784 aaPredicted RBP18.42■□□□□ 0.54
COPS3-212ENST00000539941 PSPC1Q8WXF1 523 aaKnown RBP18.42■□□□□ 0.54
COPS3-212ENST00000539941 CBWD1Q9BRT8 395 aa18.42■□□□□ 0.54
COPS3-212ENST00000539941 LRRIQ4A6NIV6 560 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms