RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 CDCA2Q69YH5 1023 aaPredicted RBP17.44■□□□□ 0.38
RPAIN-206ENST00000539417 GPBP1Q86WP2 473 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 CDR2LQ86X02 465 aaPredicted RBP17.44■□□□□ 0.38
RPAIN-206ENST00000539417 KCNG4Q8TDN1 519 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 CPB2Q96IY4 423 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 RAD9AQ99638 391 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 INO80BQ9C086 356 aaPredicted RBP17.44■□□□□ 0.38
RPAIN-206ENST00000539417 SEMA6BQ9H3T3 888 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 CERS4Q9HA82 394 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 AGPAT5Q9NUQ2 364 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 MSRAQ9UJ68 235 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 PIN4Q9Y237 131 aaKnown RBP17.44■□□□□ 0.38
RPAIN-206ENST00000539417 EYSQ5T1H1 3165 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 ATF7P17544 494 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-206ENST00000539417 PEX3P56589 373 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 KRT85P78386 507 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 TAP1Q03518 808 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 LONRF3Q496Y0 759 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 ODR4Q5SWX8 454 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 UBXN11Q5T124 520 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 SLC24A5Q71RS6 500 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 KCTD17Q8N5Z5 321 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 DEFB123Q8N688 67 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 LARP4BQ92615 738 aaKnown RBP17.43■□□□□ 0.38
RPAIN-206ENST00000539417 STAMQ92783 540 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 KIFAP3Q92845 792 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 REEP2Q9BRK0 252 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
RPAIN-206ENST00000539417 EPOPA6NHQ4 379 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 MEIS3P2A8K0S8 358 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 DGKIO75912 1065 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 FGFR1P11362 822 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 ANP32AP39687 249 aaKnown RBP17.42■□□□□ 0.38
RPAIN-206ENST00000539417 NAMPTP43490 491 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 NPTX2P47972 431 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 NUCB2P80303 420 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 GIT2Q14161 759 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 GRIN2CQ14957 1233 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 E2F4Q16254 413 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 TPRNQ4KMQ1 711 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 TAS1R3Q7RTX0 852 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 ECHDC2Q86YB7 292 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 NPAS4Q8IUM7 802 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 SP7Q8TDD2 431 aaPredicted RBP17.42■□□□□ 0.38
RPAIN-206ENST00000539417 ZNF689Q96CS4 500 aaPredicted RBP17.42■□□□□ 0.38
RPAIN-206ENST00000539417 SPATA32Q96LK8 384 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 NFKBIZQ9BYH8 718 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 CCDC113Q9H0I3 377 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 ZNF576Q9H609 170 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 HCSTQ9UBK5 93 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 CCDC39Q9UFE4 941 aa17.42■□□□□ 0.38
RPAIN-206ENST00000539417 LINC01553A4QN01 128 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 MYMKA6NI61 221 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 ZSCAN20P17040 1043 aaPredicted RBP17.41■□□□□ 0.38
RPAIN-206ENST00000539417 ARF4P18085 180 aaPredicted RBP17.41■□□□□ 0.38
RPAIN-206ENST00000539417 LIG1P18858 919 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 PAN2Q504Q3 1202 aaKnown RBP17.41■□□□□ 0.38
RPAIN-206ENST00000539417 ZNF697Q5TEC3 545 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 RESP18Q5W5W9 173 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 PPP2R2DQ66LE6 453 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 GPR153Q6NV75 609 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 DYMQ7RTS9 669 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 ZNF598Q86UK7 904 aaKnown RBP17.41■□□□□ 0.38
RPAIN-206ENST00000539417 DEPTORQ8TB45 409 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 LPPQ93052 612 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 GUCD1Q96NT3 240 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 YME1L1Q96TA2 773 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 EIF2AQ9BY44 585 aaKnown RBP17.41■□□□□ 0.38
RPAIN-206ENST00000539417 FZD8Q9H461 694 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 SLC28A3Q9HAS3 691 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 C1orf112Q9NSG2 853 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 INSL6Q9Y581 213 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 REV3LO60673 3130 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 TRANK1O15050 2925 aa17.41■□□□□ 0.38
RPAIN-206ENST00000539417 A0A0U1RQF3 1178 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 CCDC169A6NNP5 214 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 RFXAPO00287 272 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 LINC00271P0C7V0 271 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 TXLNAP40222 546 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 STAT6P42226 847 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 TWF2Q6IBS0 349 aaKnown RBP17.4■□□□□ 0.38
RPAIN-206ENST00000539417 RNF169Q8NCN4 708 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 DHX58Q96C10 678 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 IFT74Q96LB3 600 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 CHST12Q9NRB3 414 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 MTMR10Q9NXD2 777 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 STK17AQ9UEE5 414 aa17.4■□□□□ 0.38
RPAIN-206ENST00000539417 RBM19Q9Y4C8 960 aaKnown RBP17.4■□□□□ 0.38
RPAIN-206ENST00000539417 MYH11P35749 1972 aa17.39■□□□□ 0.38
RPAIN-206ENST00000539417 FNDC1Q4ZHG4 1894 aaPredicted RBP17.39■□□□□ 0.37
RPAIN-206ENST00000539417 SLC16A4O15374 487 aa17.39■□□□□ 0.37
RPAIN-206ENST00000539417 ERLIN2O94905 339 aa17.39■□□□□ 0.37
RPAIN-206ENST00000539417 CLLU1OSQ5K130 101 aa17.39■□□□□ 0.37
RPAIN-206ENST00000539417 CCDC73Q6ZRK6 1079 aa17.39■□□□□ 0.37
RPAIN-206ENST00000539417 DRC1Q96MC2 740 aa17.39■□□□□ 0.37
RPAIN-206ENST00000539417 C17orf80Q9BSJ5 609 aa17.39■□□□□ 0.37
RPAIN-206ENST00000539417 FAM105AQ9NUU6 356 aa17.39■□□□□ 0.37
RPAIN-206ENST00000539417 TMEM161AQ9NX61 479 aa17.39■□□□□ 0.37
RPAIN-206ENST00000539417 PCDHB7Q9Y5E2 793 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms