RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 MTRQ99707 1265 aa24.78■■□□□ 1.56
SCARB1-206ENST00000539320 FAM105AQ9NUU6 356 aa24.78■■□□□ 1.56
SCARB1-206ENST00000539320 FSD2A1L4K1 749 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 ZBTB39O15060 712 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 GLP2RO95838 553 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 TXKP42681 527 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 C8orf34Q49A92 452 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 PLPP4Q5VZY2 271 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 FERMT3Q86UX7 667 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 ADHFE1Q8IWW8 467 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 MSLNLQ96KJ4 702 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 CCDC43Q96MW1 224 aaKnown RBP24.77■■□□□ 1.56
SCARB1-206ENST00000539320 MTMR9Q96QG7 549 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 CDCA3Q99618 268 aaPredicted RBP24.77■■□□□ 1.56
SCARB1-206ENST00000539320 HSD17B14Q9BPX1 270 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 ENTPD7Q9NQZ7 604 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 SPG21Q9NZD8 308 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 CLEC1BQ9P126 229 aa24.77■■□□□ 1.56
SCARB1-206ENST00000539320 SRGAP2CP0DJJ0 459 aa24.76■■□□□ 1.55
SCARB1-206ENST00000539320 DUSP6Q16828 381 aa24.76■■□□□ 1.55
SCARB1-206ENST00000539320 GLB1LQ6UWU2 654 aa24.76■■□□□ 1.55
SCARB1-206ENST00000539320 SLC39A11Q8N1S5 342 aa24.76■■□□□ 1.55
SCARB1-206ENST00000539320 RNF149Q8NC42 400 aa24.76■■□□□ 1.55
SCARB1-206ENST00000539320 LPPQ93052 612 aa24.76■■□□□ 1.55
SCARB1-206ENST00000539320 ZSCAN31Q96LW9 406 aaPredicted RBP24.76■■□□□ 1.55
SCARB1-206ENST00000539320 TCF25Q9BQ70 676 aa24.76■■□□□ 1.55
SCARB1-206ENST00000539320 TMEM60Q9H2L4 133 aa24.76■■□□□ 1.55
SCARB1-206ENST00000539320 XPNPEP1Q9NQW7 623 aa24.76■■□□□ 1.55
SCARB1-206ENST00000539320 SH2B1Q9NRF2 756 aaPredicted RBP24.76■■□□□ 1.55
SCARB1-206ENST00000539320 BARX2Q9UMQ3 279 aaPredicted RBP24.76■■□□□ 1.55
SCARB1-206ENST00000539320 PI4K2BG5E9Z4 385 aa24.75■■□□□ 1.55
SCARB1-206ENST00000539320 PER2O15055 1255 aa24.75■■□□□ 1.55
SCARB1-206ENST00000539320 ASAP2O43150 1006 aa24.75■■□□□ 1.55
SCARB1-206ENST00000539320 ZNF623O75123 536 aa24.75■■□□□ 1.55
SCARB1-206ENST00000539320 EYA4O95677 639 aa24.75■■□□□ 1.55
SCARB1-206ENST00000539320 ATP2B1P20020 1258 aa24.75■■□□□ 1.55
SCARB1-206ENST00000539320 HMGN5P82970 282 aaKnown RBP24.75■■□□□ 1.55
SCARB1-206ENST00000539320 KRT17Q04695 432 aa24.75■■□□□ 1.55
SCARB1-206ENST00000539320 SMRP1Q8NCR6 262 aa24.75■■□□□ 1.55
SCARB1-206ENST00000539320 MINDY3Q9H8M7 445 aa24.75■■□□□ 1.55
SCARB1-206ENST00000539320 NGRNQ9NPE2 291 aaKnown RBP24.75■■□□□ 1.55
SCARB1-206ENST00000539320 ANKEF1Q9NU02 776 aa24.75■■□□□ 1.55
SCARB1-206ENST00000539320 POTEMA6NI47 508 aa24.74■■□□□ 1.55
SCARB1-206ENST00000539320 C19orf67A6NJJ6 358 aa24.74■■□□□ 1.55
SCARB1-206ENST00000539320 MCM7P33993 719 aa24.74■■□□□ 1.55
SCARB1-206ENST00000539320 COASYQ13057 564 aa24.74■■□□□ 1.55
SCARB1-206ENST00000539320 LONRF3Q496Y0 759 aa24.74■■□□□ 1.55
SCARB1-206ENST00000539320 POP1Q99575 1024 aaKnown RBP24.74■■□□□ 1.55
SCARB1-206ENST00000539320 KIF2CQ99661 725 aa24.74■■□□□ 1.55
SCARB1-206ENST00000539320 INPP5FQ9Y2H2 1132 aa24.74■■□□□ 1.55
SCARB1-206ENST00000539320 MEIS3P2A8K0S8 358 aa24.73■■□□□ 1.55
SCARB1-206ENST00000539320 ZC3H11AO75152 810 aaKnown RBP eCLIP24.73■■□□□ 1.55
SCARB1-206ENST00000539320 DGAT1O75907 488 aa24.73■■□□□ 1.55
SCARB1-206ENST00000539320 BCAR1P56945 870 aa24.73■■□□□ 1.55
SCARB1-206ENST00000539320 MXD4Q14582 209 aaPredicted RBP24.73■■□□□ 1.55
SCARB1-206ENST00000539320 NOMO2Q5JPE7 1267 aa24.73■■□□□ 1.55
SCARB1-206ENST00000539320 TMEM31Q5JXX7 168 aa24.73■■□□□ 1.55
SCARB1-206ENST00000539320 VN1R2Q8NFZ6 395 aa24.73■■□□□ 1.55
SCARB1-206ENST00000539320 PGBD4Q96DM1 585 aa24.73■■□□□ 1.55
SCARB1-206ENST00000539320 FOXP1Q9H334 677 aaPredicted RBP24.73■■□□□ 1.55
SCARB1-206ENST00000539320 PCDHB2Q9Y5E7 798 aa24.73■■□□□ 1.55
SCARB1-206ENST00000539320 CARNS1A5YM72 827 aa24.72■■□□□ 1.55
SCARB1-206ENST00000539320 SRGAP2BP0DMP2 458 aa24.72■■□□□ 1.55
SCARB1-206ENST00000539320 ALDH7A1P49419 539 aaKnown RBP24.72■■□□□ 1.55
SCARB1-206ENST00000539320 RARRES1P49788 294 aa24.72■■□□□ 1.55
SCARB1-206ENST00000539320 ORC2Q13416 577 aaPredicted RBP24.72■■□□□ 1.55
SCARB1-206ENST00000539320 TFDP1Q14186 410 aa24.72■■□□□ 1.55
SCARB1-206ENST00000539320 FAM184AQ8NB25 1140 aa24.72■■□□□ 1.55
SCARB1-206ENST00000539320 TMEM169Q96HH4 297 aa24.72■■□□□ 1.55
SCARB1-206ENST00000539320 TBC1D13Q9NVG8 400 aa24.72■■□□□ 1.55
SCARB1-206ENST00000539320 ERLIN2O94905 339 aa24.71■■□□□ 1.55
SCARB1-206ENST00000539320 HOXA11P31270 313 aaPredicted RBP24.71■■□□□ 1.55
SCARB1-206ENST00000539320 PTENP60484 403 aa24.71■■□□□ 1.55
SCARB1-206ENST00000539320 RBM10P98175 930 aaKnown RBP24.71■■□□□ 1.55
SCARB1-206ENST00000539320 TMC7Q7Z402 723 aa24.71■■□□□ 1.55
SCARB1-206ENST00000539320 FBXO18Q8NFZ0 1043 aa24.71■■□□□ 1.55
SCARB1-206ENST00000539320 ASAP3Q8TDY4 903 aa24.71■■□□□ 1.55
SCARB1-206ENST00000539320 LRFN3Q9BTN0 628 aa24.71■■□□□ 1.55
SCARB1-206ENST00000539320 C11orf16Q9NQ32 467 aa24.71■■□□□ 1.55
SCARB1-206ENST00000539320 CNTNAP2Q9UHC6 1331 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 FAM86C2PA6NEL3 165 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 HIDE1A8MVS5 230 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 NT5C1B-RDH14C9J2C7 533 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 OFD1O75665 1012 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 OR52Z1P0C646 297 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 RNASELQ05823 741 aaKnown RBP24.7■■□□□ 1.54
SCARB1-206ENST00000539320 GNL2Q13823 731 aaKnown RBP24.7■■□□□ 1.54
SCARB1-206ENST00000539320 CAPSQ13938 189 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 SMC1AQ14683 1233 aaKnown RBP24.7■■□□□ 1.54
SCARB1-206ENST00000539320 PCBP1Q15365 356 aaKnown RBP eCLIP24.7■■□□□ 1.544e-11■■■□□ 14.6
SCARB1-206ENST00000539320 UBXN11Q5T124 520 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 AGMOQ6ZNB7 445 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 IFNLR1Q8IU57 520 aaPredicted RBP24.7■■□□□ 1.54
SCARB1-206ENST00000539320 URGCPQ8TCY9 931 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 PIGOQ8TEQ8 1089 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 NRDE2Q9H7Z3 1164 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 RSAD1Q9HA92 442 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 RAPGEFL1Q9UHV5 662 aa24.7■■□□□ 1.54
SCARB1-206ENST00000539320 USP15Q9Y4E8 981 aaPredicted RBP24.7■■□□□ 1.54
SCARB1-206ENST00000539320 DCXO43602 365 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms