RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 NCKAP1LP55160 1127 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 CLDN10P78369 228 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 ARID5AQ03989 594 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 PLCB4Q15147 1175 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 IFI16Q16666 785 aaKnown RBP7.53□□□□□ -1.2
PROM1-219ENST00000539194 KCTD19Q17RG1 926 aaPredicted RBP7.53□□□□□ -1.2
PROM1-219ENST00000539194 CFAP58Q5T655 872 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 TTC19Q6DKK2 380 aaPredicted RBP7.53□□□□□ -1.2
PROM1-219ENST00000539194 NLRP14Q86W24 1093 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 ARHGEF19Q8IW93 802 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 PRELID2Q8N945 189 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 OR2W6PQ8NHA6 318 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 PGM2Q96G03 612 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 PRMT6Q96LA8 375 aaPredicted RBP7.53□□□□□ -1.2
PROM1-219ENST00000539194 FBXL18Q96ME1 805 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 DNAJC12Q9UKB3 198 aa7.53□□□□□ -1.2
PROM1-219ENST00000539194 FOXN3O00409 490 aaPredicted RBP7.52□□□□□ -1.2
PROM1-219ENST00000539194 GDF11O95390 407 aa7.52□□□□□ -1.2
PROM1-219ENST00000539194 GCNT3O95395 438 aa7.52□□□□□ -1.2
PROM1-219ENST00000539194 ADSSP30520 456 aa7.52□□□□□ -1.2
PROM1-219ENST00000539194 SEC24CP53992 1094 aa7.52□□□□□ -1.2
PROM1-219ENST00000539194 CYP4A11Q02928 519 aa7.52□□□□□ -1.2
PROM1-219ENST00000539194 ERMARDQ5T6L9 678 aa7.52□□□□□ -1.2
PROM1-219ENST00000539194 PROCA1Q8NCQ7 364 aaPredicted RBP7.52□□□□□ -1.2
PROM1-219ENST00000539194 TATDN2Q93075 761 aa7.52□□□□□ -1.2
PROM1-219ENST00000539194 DBNDD1Q9H9R9 158 aa7.52□□□□□ -1.2
PROM1-219ENST00000539194 POLD4Q9HCU8 107 aa7.52□□□□□ -1.2
PROM1-219ENST00000539194 A1CFQ9NQ94 594 aaKnown RBP7.52□□□□□ -1.2
PROM1-219ENST00000539194 AAASQ9NRG9 546 aa7.52□□□□□ -1.2
PROM1-219ENST00000539194 HERC5Q9UII4 1024 aaKnown RBP7.52□□□□□ -1.2
PROM1-219ENST00000539194 GH2P01242 217 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 CYP1A2P05177 515 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 IVDP26440 423 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 CEP55Q53EZ4 464 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 C15orf39Q6ZRI6 1047 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 EPS8L1Q8TE68 723 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 IFT81Q8WYA0 676 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 KREMEN1Q96MU8 473 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 RPS6KC1Q96S38 1066 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 RIT2Q99578 217 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 ERP44Q9BS26 406 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.52□□□□□ -1.21
PROM1-219ENST00000539194 PDLIM7Q9NR12 457 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 EURLQ9NYK6 297 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 DDX20Q9UHI6 824 aaKnown RBP7.52□□□□□ -1.21
PROM1-219ENST00000539194 UBIAD1Q9Y5Z9 338 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 SHBGP04278 402 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 CTNNA1P35221 906 aaKnown RBP7.52□□□□□ -1.21
PROM1-219ENST00000539194 PIGWQ7Z7B1 504 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 KLHL7Q8IXQ5 586 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 MTMR14Q8NCE2 650 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 ACER1Q8TDN7 264 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 SLC20A1Q8WUM9 679 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 CYFIP2Q96F07 1278 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 FAM107BQ9H098 131 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 CNOT7Q9UIV1 285 aaKnown RBP7.52□□□□□ -1.21
PROM1-219ENST00000539194 SSC5DA1L4H1 1573 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 MPHOSPH10O00566 681 aaKnown RBP7.52□□□□□ -1.21
PROM1-219ENST00000539194 DRD4P21917 467 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 PDE6BP35913 854 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 MARCKSL1P49006 195 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 STAT2P52630 851 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 MRPS9P82933 396 aaKnown RBP7.52□□□□□ -1.21
PROM1-219ENST00000539194 ACTN3Q08043 901 aaPredicted RBP7.52□□□□□ -1.21
PROM1-219ENST00000539194 TCP10Q12799 353 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 DHX34Q14147 1143 aaKnown RBP7.52□□□□□ -1.21
PROM1-219ENST00000539194 USH1GQ495M9 461 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 AADACL2Q6P093 401 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 NLGN1Q8N2Q7 840 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 HELQQ8TDG4 1101 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 CCT6BQ92526 530 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 KRT35Q92764 455 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 ART4Q93070 314 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 JPH2Q9BR39 696 aaPredicted RBP7.52□□□□□ -1.21
PROM1-219ENST00000539194 VCPKMTQ9H867 229 aa7.52□□□□□ -1.21
PROM1-219ENST00000539194 UTRNP46939 3433 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 FAM187AA6NFU0 413 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 SPDYE3A6NKU9 549 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 PHF20L1A8MW92 1017 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 TULP1O00294 542 aaPredicted RBP7.51□□□□□ -1.21
PROM1-219ENST00000539194 DNM1LO00429 736 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 KRIT1O00522 736 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 EBAG9O00559 213 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 CEP104O60308 925 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 SSBP05455 408 aaKnown RBP eCLIP7.51□□□□□ -1.21
PROM1-219ENST00000539194 ATP1A2P50993 1020 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 GSCP56915 257 aaPredicted RBP7.51□□□□□ -1.21
PROM1-219ENST00000539194 SNRPFP62306 86 aaKnown RBP7.51□□□□□ -1.21
PROM1-219ENST00000539194 SETQ01105 290 aaPredicted RBP7.51□□□□□ -1.21
PROM1-219ENST00000539194 DRP2Q13474 957 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 SLC39A4Q6P5W5 647 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 PEX26Q7Z412 305 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 FAM228AQ86W67 206 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 MICALL1Q8N3F8 863 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 LMBR1Q8WVP7 490 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 SHC3Q92529 594 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 AGPAT1Q99943 283 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 MXRA8Q9BRK3 442 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 FAM114A2Q9NRY5 505 aa7.51□□□□□ -1.21
PROM1-219ENST00000539194 SPDYE2BA6NHP3 402 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms