RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 FOXD4L3Q6VB84 417 aaPredicted RBP16.62■□□□□ 0.25
PRPF19-203ENST00000539180 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
PRPF19-203ENST00000539180 CATSPER4Q7RTX7 472 aa16.62■□□□□ 0.25
PRPF19-203ENST00000539180 CHAMP1Q96JM3 812 aa16.62■□□□□ 0.25
PRPF19-203ENST00000539180 TIPINQ9BVW5 301 aa16.62■□□□□ 0.25
PRPF19-203ENST00000539180 CCDC113Q9H0I3 377 aa16.62■□□□□ 0.25
PRPF19-203ENST00000539180 SEMA6BQ9H3T3 888 aa16.62■□□□□ 0.25
PRPF19-203ENST00000539180 ELAC1Q9H777 363 aaKnown RBP16.62■□□□□ 0.25
PRPF19-203ENST00000539180 SLC28A3Q9HAS3 691 aa16.62■□□□□ 0.25
PRPF19-203ENST00000539180 TMEM161AQ9NX61 479 aa16.62■□□□□ 0.25
PRPF19-203ENST00000539180 STK17AQ9UEE5 414 aa16.62■□□□□ 0.25
PRPF19-203ENST00000539180 PIN4Q9Y237 131 aaKnown RBP16.62■□□□□ 0.25
PRPF19-203ENST00000539180 CHD7Q9P2D1 2997 aa16.62■□□□□ 0.25
PRPF19-203ENST00000539180 LINC01553A4QN01 128 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 LRRIQ4A6NIV6 560 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 CUTAO60888 179 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 HIP1RO75146 1068 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 UPP2O95045 317 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 HOXA11P31270 313 aaPredicted RBP16.61■□□□□ 0.25
PRPF19-203ENST00000539180 PPP2R5AQ15172 486 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 ARSHQ5FYA8 562 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 SHC4Q6S5L8 630 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 ZNF598Q86UK7 904 aaKnown RBP16.61■□□□□ 0.25
PRPF19-203ENST00000539180 LARP4BQ92615 738 aaKnown RBP16.61■□□□□ 0.25
PRPF19-203ENST00000539180 YME1L1Q96TA2 773 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 ZBED2Q9BTP6 218 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 RNF19AQ9NV58 838 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 DACT1Q9NYF0 836 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 DAXXQ9UER7 740 aaPredicted RBP16.61■□□□□ 0.25
PRPF19-203ENST00000539180 RCOR1Q9UKL0 485 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 CFAP45Q9UL16 551 aa16.61■□□□□ 0.25
PRPF19-203ENST00000539180 A0A0U1RQF3 1178 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 EDN1P05305 212 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 STAG3L1P0CL83 205 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 ZSCAN20P17040 1043 aaPredicted RBP16.6■□□□□ 0.25
PRPF19-203ENST00000539180 TXLNAP40222 546 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 MCM6Q14566 821 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 FAM187BQ17R55 369 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 UBXN11Q5T124 520 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 ECHDC2Q86YB7 292 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 CMTR2Q8IYT2 770 aaKnown RBP16.6■□□□□ 0.25
PRPF19-203ENST00000539180 RASSF8Q8NHQ8 419 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 DRC1Q96MC2 740 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 FAM161BQ96MY7 647 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 KIFC3Q9BVG8 833 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 FZD8Q9H461 694 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 C17orf75Q9HAS0 396 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 CNTNAP2Q9UHC6 1331 aa16.6■□□□□ 0.25
PRPF19-203ENST00000539180 INO80B-WBP1J3KQ70 363 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 ERLIN2O94905 339 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 SSBP05455 408 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRPF19-203ENST00000539180 AXLP30530 894 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 NPTX2P47972 431 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 KRT85P78386 507 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 GRIN2CQ14957 1233 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 E2F4Q16254 413 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 GPBP1Q86WP2 473 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 ZBTB8OSQ8IWT0 167 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 KCNN1Q92952 543 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 CCDC51Q96ER9 411 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 PRIMPOLQ96LW4 560 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 REEP2Q9BRK0 252 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 C2orf40Q9H1Z8 148 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 POLD4Q9HCU8 107 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 FAM105AQ9NUU6 356 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 ARHGAP28Q9P2N2 729 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 CCDC39Q9UFE4 941 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 ODF2LQ9ULJ1 636 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 PCDHA7Q9UN72 937 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 PHLPP2Q6ZVD8 1323 aa16.59■□□□□ 0.25
PRPF19-203ENST00000539180 NPHP3-ACAD11A0A0J9YXS1 232 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 EPOPA6NHQ4 379 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 B4GALT5O43286 388 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 SLC34A2O95436 690 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 ARF4P18085 180 aaPredicted RBP16.58■□□□□ 0.24
PRPF19-203ENST00000539180 GATMP50440 423 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 RAB27AP51159 221 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 ZNF131P52739 623 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 ERVK-21P61565 698 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 NUCB2P80303 420 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 TWF2Q6IBS0 349 aaKnown RBP16.58■□□□□ 0.24
PRPF19-203ENST00000539180 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 LEO1Q8WVC0 666 aaPredicted RBP16.58■□□□□ 0.24
PRPF19-203ENST00000539180 IFT74Q96LB3 600 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 PRMT7Q9NVM4 692 aaPredicted RBP16.58■□□□□ 0.24
PRPF19-203ENST00000539180 RNF216Q9NWF9 866 aaPredicted RBP16.58■□□□□ 0.24
PRPF19-203ENST00000539180 ATP6V1DQ9Y5K8 247 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 PLXNA4Q9HCM2 1894 aa16.58■□□□□ 0.24
PRPF19-203ENST00000539180 TTLL13PA6NNM8 815 aa16.57■□□□□ 0.24
PRPF19-203ENST00000539180 ZNF623O75123 536 aa16.57■□□□□ 0.24
PRPF19-203ENST00000539180 FGFR1P11362 822 aa16.57■□□□□ 0.24
PRPF19-203ENST00000539180 PLS3P13797 630 aa16.57■□□□□ 0.24
PRPF19-203ENST00000539180 PEX3P56589 373 aa16.57■□□□□ 0.24
PRPF19-203ENST00000539180 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
PRPF19-203ENST00000539180 RAD51AP2Q09MP3 1159 aa16.57■□□□□ 0.24
PRPF19-203ENST00000539180 DMP1Q13316 513 aaPredicted RBP16.57■□□□□ 0.24
PRPF19-203ENST00000539180 CLLU1OSQ5K130 101 aa16.57■□□□□ 0.24
PRPF19-203ENST00000539180 RRAGBQ5VZM2 374 aa16.57■□□□□ 0.24
PRPF19-203ENST00000539180 RESP18Q5W5W9 173 aa16.57■□□□□ 0.24
PRPF19-203ENST00000539180 NOTUMQ6P988 496 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms