RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 NAA15Q9BXJ9 866 aaKnown RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 UNKQ9C0B0 810 aaKnown RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SIK2Q9H0K1 926 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 CASS4Q9NQ75 786 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 AASDHPPTQ9NRN7 309 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 IMPACTQ9P2X3 320 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 STOML1Q9UBI4 398 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 EVLQ9UI08 416 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SH2B3Q9UQQ2 575 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 ZKSCAN5Q9Y2L8 839 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 PCDHGB3Q9Y5G1 929 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 MBD3L4A6NDZ8 208 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 MBD3L3A6NE82 208 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SCDO00767 359 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SLC27A2O14975 620 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 AREL1O15033 823 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 ADCY6O43306 1168 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 FSBPO95073 299 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 HSP90AA1P07900 732 aaKnown RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 MMEP08473 750 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 CD8BP10966 210 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 FAHP16930 419 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 RPL10P27635 214 aaKnown RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SLC5A2P31639 672 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SOX10P56693 466 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 RAB39AQ14964 217 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 CLCA4Q14CN2 919 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SOWAHCQ53LP3 525 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 OVCH2Q7RTZ1 564 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 NBPF11Q86T75 865 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 ZBTB34Q8NCN2 500 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 PPIL4Q8WUA2 492 aaKnown RBP eCLIP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 DPF2Q92785 391 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 USP7Q93009 1102 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 GJA10Q969M2 543 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 PGBD4Q96DM1 585 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 FAXDC2Q96IV6 333 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 BHMT2Q9H2M3 363 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 PRDM16Q9HAZ2 1276 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 TNFRSF12AQ9NP84 129 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 KMT5AQ9NQR1 393 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 MAN1C1Q9NR34 630 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 TOMM22Q9NS69 142 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 OBP2AQ9NY56 170 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 BTBD7Q9P203 1132 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SAP30BPQ9UHR5 308 aaKnown RBP1.35□□□□□ -2.19
HIF1A-204ENST00000539097 SPATA31A1Q5TZJ5 1347 aa1.35□□□□□ -2.19
HIF1A-204ENST00000539097 TEX51A0A1B0GUA7 166 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 C22orf46C9J442 243 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 TPP1O14773 563 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 TJP3O95049 919 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 SGPL1O95470 568 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 GYS1P13807 737 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 PAX3P23760 479 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 SEPHS1P49903 392 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 PTTG1IPP53801 180 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 MXRA7P84157 204 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 GRIN1Q05586 938 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 EGR3Q06889 387 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 MLC1Q15049 377 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 PGS1Q32NB8 556 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 C4orf46Q504U0 113 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 ATAT1Q5SQI0 421 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 ARTNQ5T4W7 220 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 ISM2Q6H9L7 571 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 SLC4A10Q6U841 1118 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 HACE1Q8IYU2 909 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 THEMISQ8N1K5 641 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-204ENST00000539097 NEK9Q8TD19 979 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 NSUN6Q8TEA1 469 aaKnown RBP1.34□□□□□ -2.19
HIF1A-204ENST00000539097 SLC5A5Q92911 643 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 IL17RAQ96F46 866 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 AHCYL2Q96HN2 611 aaKnown RBP1.34□□□□□ -2.19
HIF1A-204ENST00000539097 NELL2Q99435 816 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 SPOCK3Q9BQ16 436 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 HERPUD2Q9BSE4 406 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 GJB4Q9NTQ9 266 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 MRPS18AQ9NVS2 196 aaKnown RBP1.34□□□□□ -2.19
HIF1A-204ENST00000539097 SRPK3Q9UPE1 567 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 A0A088AWK7 358 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 A0A0A6YYK5 440 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-204ENST00000539097 A0A1B0GVC2 190 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 F8W8V4 182 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 TPD52L2O43399 206 aaKnown RBP1.34□□□□□ -2.19
HIF1A-204ENST00000539097 KDM1AO60341 852 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 GAS7O60861 476 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 MPIG6BO95866 241 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 FUCA1P04066 466 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 ATF3P18847 181 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 ARL4AP40617 200 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 KIF11P52732 1056 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 ALDH6A1Q02252 535 aaKnown RBP1.34□□□□□ -2.19
HIF1A-204ENST00000539097 PPP3CAQ08209 521 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 TBX2Q13207 712 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-204ENST00000539097 FZD5Q13467 585 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 RRP12Q5JTH9 1297 aaKnown RBP1.34□□□□□ -2.19
HIF1A-204ENST00000539097 IQSEC1Q6DN90 963 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 HMBOX1Q6NT76 420 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 KLHDC10Q6PID8 442 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 PDZD4Q76G19 769 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms