RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 FAM47CQ5HY64 1035 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 CDKAL1Q5VV42 579 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 CXCL17Q6UXB2 119 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 CREBRFQ8IUR6 639 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 ZNF710Q8N1W2 664 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 KLHDC9Q8NEP7 349 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 BSNDQ8WZ55 320 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 VTI1AQ96AJ9 217 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 NLRP4Q96MN2 994 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 FIZ1Q96SL8 496 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 KCTD10Q9H3F6 313 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 ARHGAP28Q9P2N2 729 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 TBX20Q9UMR3 447 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 TRAF3IP3Q9Y228 551 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 GOLGA6L6A8MZA4 724 aa16.91■□□□□ 0.3
VAMP1-207ENST00000539047 HNRNPDLO14979 420 aaKnown RBP16.91■□□□□ 0.3
VAMP1-207ENST00000539047 CYP2C9P11712 490 aa16.91■□□□□ 0.3
VAMP1-207ENST00000539047 NR2F2P24468 414 aa16.91■□□□□ 0.3
VAMP1-207ENST00000539047 MTIF2P46199 727 aaKnown RBP16.91■□□□□ 0.3
VAMP1-207ENST00000539047 PMS1P54277 932 aaKnown RBP16.91■□□□□ 0.3
VAMP1-207ENST00000539047 ZCWPW2Q504Y3 356 aa16.91■□□□□ 0.3
VAMP1-207ENST00000539047 RSPH3Q86UC2 560 aa16.91■□□□□ 0.3
VAMP1-207ENST00000539047 MAP4K3Q8IVH8 894 aa16.91■□□□□ 0.3
VAMP1-207ENST00000539047 RNF149Q8NC42 400 aa16.91■□□□□ 0.3
VAMP1-207ENST00000539047 GLT1D1Q96MS3 346 aa16.91■□□□□ 0.3
VAMP1-207ENST00000539047 DUSP9Q99956 384 aaKnown RBP16.91■□□□□ 0.3
VAMP1-207ENST00000539047 KIFC3Q9BVG8 833 aa16.91■□□□□ 0.3
VAMP1-207ENST00000539047 STRA6Q9BX79 667 aa16.91■□□□□ 0.3
VAMP1-207ENST00000539047 TMEM134Q9H6X4 195 aa16.91■□□□□ 0.3
VAMP1-207ENST00000539047 SAMSN1Q9NSI8 373 aaKnown RBP16.91■□□□□ 0.3
VAMP1-207ENST00000539047 TNRC18O15417 2968 aaPredicted RBP16.91■□□□□ 0.3
VAMP1-207ENST00000539047 ZMYM2Q9UBW7 1377 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 SMIM35A0A1B0GVV1 85 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 M0QZ92 97 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 NR3C1P04150 777 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 SRGAP2CP0DJJ0 459 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 EPB41P11171 864 aaKnown RBP16.9■□□□□ 0.3
VAMP1-207ENST00000539047 ZNF18P17022 549 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 RGS19P49795 217 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 LIG4P49917 911 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 IRX5P78411 483 aaPredicted RBP16.9■□□□□ 0.3
VAMP1-207ENST00000539047 FANCCQ00597 558 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 MLLT1Q03111 559 aaPredicted RBP16.9■□□□□ 0.3
VAMP1-207ENST00000539047 POU5F1BQ06416 359 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 CCDC173Q0VFZ6 552 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 NFIL3Q16649 462 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 MAPK6Q16659 721 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 TMEM132AQ24JP5 1023 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 HSP90AA4PQ58FG1 418 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 TCP11X2Q5H9J9 407 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 ARMCX5Q6P1M9 558 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 TAF2Q6P1X5 1199 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 FBXO46Q6PJ61 603 aaPredicted RBP16.9■□□□□ 0.3
VAMP1-207ENST00000539047 ZNF410Q86VK4 478 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 NLRP7Q8WX94 980 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 KCNN1Q92952 543 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 CNOT6LQ96LI5 555 aaKnown RBP16.9■□□□□ 0.3
VAMP1-207ENST00000539047 FRMD4BQ9Y2L6 1034 aa16.9■□□□□ 0.3
VAMP1-207ENST00000539047 MBLAC1A4D2B0 266 aaPredicted RBP16.89■□□□□ 0.29
VAMP1-207ENST00000539047 SLC16A3O15427 465 aaKnown RBP16.89■□□□□ 0.29
VAMP1-207ENST00000539047 ADCY5O95622 1261 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 ACLYP53396 1101 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 UBASH3AP57075 661 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 PTPN11Q06124 597 aaPredicted RBP16.89■□□□□ 0.29
VAMP1-207ENST00000539047 ADAM9Q13443 819 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 DRP2Q13474 957 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 MYBPC2Q14324 1141 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 NBPF20Q3BBV1 942 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 CDCA2Q69YH5 1023 aaPredicted RBP16.89■□□□□ 0.29
VAMP1-207ENST00000539047 DRC7Q8IY82 874 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 MED15Q96RN5 788 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 MRPL4Q9BYD3 311 aaKnown RBP16.89■□□□□ 0.29
VAMP1-207ENST00000539047 NFKBIZQ9BYH8 718 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 FAM49AQ9H0Q0 323 aaPredicted RBP16.89■□□□□ 0.29
VAMP1-207ENST00000539047 UNC93B1Q9H1C4 597 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 AGPAT3Q9NRZ7 376 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 IFNKQ9P0W0 207 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 HDAC6Q9UBN7 1215 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 GTF2IRD1Q9UHL9 959 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 NOD1Q9Y239 953 aa16.89■□□□□ 0.29
VAMP1-207ENST00000539047 TRIP12Q14669 1992 aaPredicted RBP16.89■□□□□ 0.29
VAMP1-207ENST00000539047 PES1O00541 588 aaKnown RBP16.88■□□□□ 0.29
VAMP1-207ENST00000539047 KIAA0391O15091 583 aaKnown RBP16.88■□□□□ 0.29
VAMP1-207ENST00000539047 PRKCBP05771 671 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 CCL5P13501 91 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 ATP1A3P13637 1013 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 MATR3P43243 847 aaKnown RBP eCLIP16.88■□□□□ 0.29
VAMP1-207ENST00000539047 ZNF75DP51815 510 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 MARCH8Q5T0T0 291 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 SLFN12LQ6IEE8 588 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.88■□□□□ 0.29
VAMP1-207ENST00000539047 FILIP1Q7Z7B0 1213 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 SESTD1Q86VW0 696 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 KSR1Q8IVT5 923 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 LINC01465Q8N7H1 131 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 SEZ6LQ9BYH1 1024 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 RNF208Q9H0X6 261 aa16.88■□□□□ 0.29
VAMP1-207ENST00000539047 METTL14Q9HCE5 456 aaKnown RBP16.88■□□□□ 0.29
VAMP1-207ENST00000539047 ADGRA3Q8IWK6 1321 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms