RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 CCDC43Q96MW1 224 aaKnown RBP15.24■□□□□ 0.03
LIMK1-208ENST00000538333 SELENOOQ9BVL4 669 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 HPCAL4Q9UM19 191 aa15.24■□□□□ 0.03
LIMK1-208ENST00000538333 WDR90Q96KV7 1748 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 SSC5DA1L4H1 1573 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 C19orf81C9J6K1 198 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 P4HA2O15460 535 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 CYP2C19P33261 490 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 EPC2Q52LR7 807 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 GLE1Q53GS7 698 aaKnown RBP15.23■□□□□ 0.03
LIMK1-208ENST00000538333 SLC17A8Q8NDX2 589 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 TRPM4Q8TD43 1214 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 KLRG1Q96E93 195 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 GOLPH3Q9H4A6 298 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.23■□□□□ 0.03
LIMK1-208ENST00000538333 STIM2Q9P246 746 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 PCDHA10Q9Y5I2 948 aa15.23■□□□□ 0.03
LIMK1-208ENST00000538333 ZNF862O60290 1169 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 STBD1O95210 358 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 KIF4AO95239 1232 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 LMNB1P20700 586 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 TNFRSF8P28908 595 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 DNA2P51530 1060 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 GALCP54803 685 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 MRPS25P82663 173 aaKnown RBP15.22■□□□□ 0.03
LIMK1-208ENST00000538333 SLC7A5Q01650 507 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 KIF22Q14807 665 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 NLRX1Q86UT6 975 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 FMNL3Q8IVF7 1028 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 GLYCTKQ8IVS8 523 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 TMEM161BQ8NDZ6 487 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 IWS1Q96ST2 819 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 TCEAL9Q9UHQ7 104 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 NCANO14594 1321 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 PMM2O15305 246 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 ADSSP30520 456 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 TNNT3P45378 269 aaPredicted RBP15.22■□□□□ 0.03
LIMK1-208ENST00000538333 NOP2P46087 812 aaKnown RBP15.22■□□□□ 0.03
LIMK1-208ENST00000538333 RPS6KA1Q15418 735 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 FAM102BQ5T8I3 360 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 C8orf74Q6P047 294 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 CATSPERGQ6ZRH7 1159 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 TRMT1LQ7Z2T5 733 aaKnown RBP15.22■□□□□ 0.03
LIMK1-208ENST00000538333 NSUN6Q8TEA1 469 aaKnown RBP15.22■□□□□ 0.03
LIMK1-208ENST00000538333 HINFPQ9BQA5 517 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 ACBD3Q9H3P7 528 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 CYP39A1Q9NYL5 469 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 TMEM59LQ9UK28 342 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 STXBP5LQ9Y2K9 1186 aa15.22■□□□□ 0.03
LIMK1-208ENST00000538333 POLR2AP24928 1970 aaKnown RBP15.21■□□□□ 0.03
LIMK1-208ENST00000538333 FOXN3O00409 490 aaPredicted RBP15.21■□□□□ 0.03
LIMK1-208ENST00000538333 LRRN2O75325 713 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 ADRB2P07550 413 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 CCDC172P0C7W6 258 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 NPTX2P47972 431 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 GYS2P54840 703 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 MAP4K3Q8IVH8 894 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 USP38Q8NB14 1042 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 FAM71BQ8TC56 605 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 GDAP1L1Q96MZ0 367 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 MED4Q9NPJ6 270 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 ADAM21Q9UKJ8 722 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 TBX20Q9UMR3 447 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 USP20Q9Y2K6 914 aa15.21■□□□□ 0.03
LIMK1-208ENST00000538333 GCLMP48507 274 aa15.21■□□□□ 0.02
LIMK1-208ENST00000538333 ARHGAP44Q17R89 818 aa15.21■□□□□ 0.02
LIMK1-208ENST00000538333 NOL9Q5SY16 702 aaKnown RBP15.21■□□□□ 0.02
LIMK1-208ENST00000538333 ARHGEF19Q8IW93 802 aa15.21■□□□□ 0.02
LIMK1-208ENST00000538333 BSNDQ8WZ55 320 aa15.21■□□□□ 0.02
LIMK1-208ENST00000538333 ZBTB9Q96C00 473 aa15.21■□□□□ 0.02
LIMK1-208ENST00000538333 HVCN1Q96D96 273 aa15.21■□□□□ 0.02
LIMK1-208ENST00000538333 NTPCRQ9BSD7 190 aaKnown RBP15.21■□□□□ 0.02
LIMK1-208ENST00000538333 TEX13BQ9BXU2 312 aa15.21■□□□□ 0.02
LIMK1-208ENST00000538333 A1CFQ9NQ94 594 aaKnown RBP15.21■□□□□ 0.02
LIMK1-208ENST00000538333 GABBR1Q9UBS5 961 aa15.21■□□□□ 0.02
LIMK1-208ENST00000538333 TELO2Q9Y4R8 837 aa15.21■□□□□ 0.02
LIMK1-208ENST00000538333 MYH9P35579 1960 aaKnown RBP15.21■□□□□ 0.02
LIMK1-208ENST00000538333 PTPRFP10586 1907 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 PFASO15067 1338 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 NFASCO94856 1347 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 ANKRD63C9JTQ0 380 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 SOCS7O14512 581 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 SYF2O95926 243 aaKnown RBP15.2■□□□□ 0.02
LIMK1-208ENST00000538333 TMEM253P0C7T8 217 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 SPIRE2Q8WWL2 714 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 CCDC102AQ96A19 550 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 PBKQ96KB5 322 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 KIFC3Q9BVG8 833 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 TMEM117Q9H0C3 514 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 PDLIM7Q9NR12 457 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 GGA3Q9NZ52 723 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 FAN1Q9Y2M0 1017 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 IGSF9BQ9UPX0 1349 aa15.2■□□□□ 0.02
LIMK1-208ENST00000538333 SPDYE16A6NNV3 312 aaPredicted RBP15.19■□□□□ 0.02
LIMK1-208ENST00000538333 KCNK3O14649 394 aa15.19■□□□□ 0.02
LIMK1-208ENST00000538333 GLI1P08151 1106 aa15.19■□□□□ 0.02
LIMK1-208ENST00000538333 SMTNP53814 917 aa15.19■□□□□ 0.02
LIMK1-208ENST00000538333 CETN1Q12798 172 aa15.19■□□□□ 0.02
LIMK1-208ENST00000538333 DMP1Q13316 513 aaPredicted RBP15.19■□□□□ 0.02
LIMK1-208ENST00000538333 NT5DC3Q86UY8 548 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms