RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PADI3Q9ULW8 664 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 CCDC88AQ3V6T2 1871 aa7.9□□□□□ -1.15
MSH6-209ENST00000538136 STK36Q9NRP7 1315 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 A0A0U1RQG5 324 aaPredicted RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 SPATA31C2B4DYI2 1134 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 RGS20O76081 388 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 WEE2P0C1S8 567 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 MLH1P40692 756 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 NOP2P46087 812 aaKnown RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 UBASH3AP57075 661 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 ECM1Q16610 540 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 WDR72Q3MJ13 1102 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 RINT1Q6NUQ1 792 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 TRMT1Q9NXH9 659 aaKnown RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 EPB41L2O43491 1005 aaKnown RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 B4GALT4O60513 344 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 TNNC2P02585 160 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 EIF4BP23588 611 aaKnown RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 COASYQ13057 564 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 PAK1Q13153 545 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 ZSCAN23Q3MJ62 389 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 ZNF746Q6NUN9 644 aaPredicted RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 RSRC2Q7L4I2 434 aaKnown RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 PASD1Q8IV76 773 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 SMAP1Q8IYB5 467 aaPredicted RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 TCP11Q8WWU5 503 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 RAD54LQ92698 747 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 SHISA4Q96DD7 197 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 CBWD1Q9BRT8 395 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 ALG13Q9NP73 1137 aaKnown RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 IFNKQ9P0W0 207 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 ARMCX3Q9UH62 379 aaPredicted RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 AGAP1Q9UPQ3 857 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 CLTBP09497 229 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 CXCL8P10145 99 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 MYOGP15173 224 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 RPL17P18621 184 aaKnown RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 ACAT1P24752 427 aaKnown RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 U2AF2P26368 475 aaKnown RBP eCLIP7.89□□□□□ -1.152e-9■■■■■ 28.4
MSH6-209ENST00000538136 PIK3CAP42336 1068 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 NPTX2P47972 431 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 ARHGAP1Q07960 439 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 EPC2Q52LR7 807 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 ATF7IP2Q5U623 682 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 BBXQ8WY36 941 aaPredicted RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 FANCLQ9NW38 375 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 ZNHIT6Q9NWK9 470 aaKnown RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 FBXO2Q9UK22 296 aaPredicted RBP7.89□□□□□ -1.15
MSH6-209ENST00000538136 TTLL3Q9Y4R7 772 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 CEP83Q9Y592 693 aa7.89□□□□□ -1.15
MSH6-209ENST00000538136 H0YGN5 161 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 MAFGO15525 162 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 IGSF3O75054 1194 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 KCNA2P16389 499 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 RPA1P27694 616 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 EEF1DP3Q658K8 133 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 TMEM130Q8N3G9 435 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 DNAJC5GQ8N7S2 189 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 ASAP3Q8TDY4 903 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 SEPT5Q99719 369 aaPredicted RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 TOPORSQ9NS56 1045 aaPredicted RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 SAMSN1Q9NSI8 373 aaKnown RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 FAM49BQ9NUQ9 324 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 RCOR1Q9UKL0 485 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 AGO2Q9UKV8 859 aaKnown RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 UBIAD1Q9Y5Z9 338 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 TAF1LQ8IZX4 1826 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 CACNA1FO60840 1977 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 LETM1O95202 739 aaPredicted RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 SLFN14P0C7P3 912 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 WEE1P30291 646 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 HSD17B4P51659 736 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 PSMD2Q13200 908 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 GRB10Q13322 594 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 FAM186BQ8IYM0 893 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 GPR152Q8TDT2 470 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 ACAP3Q96P50 834 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 RBAKQ9NYW8 714 aaPredicted RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 WRAP73Q9P2S5 460 aaPredicted RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 DUOX1Q9NRD9 1551 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 RRN3P2A6NIE6 340 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 MAGEB2O15479 319 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 XRCC5P13010 732 aaKnown RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 BMS1Q14692 1282 aaKnown RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 STX1AQ16623 288 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 LRRC26Q2I0M4 334 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 PLPP4Q5VZY2 271 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 TAPT1Q6NXT6 567 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 LRRC8DQ7L1W4 858 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 CACUL1Q86Y37 369 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 CCDC155Q8N6L0 562 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 GPT2Q8TD30 523 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 ACCSQ96QU6 501 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 PYM1Q9BRP8 204 aaKnown RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 NXF3Q9H4D5 531 aaKnown RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 LMBRD1Q9NUN5 540 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 NOC2LQ9Y3T9 749 aaKnown RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 CACNA1EQ15878 2313 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 ESYT2A0FGR8 921 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 ARVCFO00192 962 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms